scholarly journals Standardization of imaging methods for machine learning in neuro-oncology

2020 ◽  
Vol 2 (Supplement_4) ◽  
pp. iv49-iv55
Author(s):  
Xiao Tian Li ◽  
Raymond Y Huang

Abstract Radiomics is a novel technique in which quantitative phenotypes or features are extracted from medical images. Machine learning enables analysis of large quantities of medical imaging data generated by radiomic feature extraction. A growing number of studies based on these methods have developed tools for neuro-oncology applications. Despite the initial promises, many of these imaging tools remain far from clinical implementation. One major limitation hindering the use of these models is their lack of reproducibility when applied across different institutions and clinical settings. In this article, we discuss the importance of standardization of methodology and reporting in our effort to improve reproducibility. Ongoing efforts of standardization for neuro-oncological imaging are reviewed. Challenges related to standardization and potential disadvantages in over-standardization are also described. Ultimately, greater multi-institutional collaborative effort is needed to provide and implement standards for data acquisition and analysis methods to facilitate research results to be interoperable and reliable for integration into different practice environments.

Radiology ◽  
2020 ◽  
Vol 295 (1) ◽  
pp. 4-15 ◽  
Author(s):  
Martin J. Willemink ◽  
Wojciech A. Koszek ◽  
Cailin Hardell ◽  
Jie Wu ◽  
Dominik Fleischmann ◽  
...  

Sensors ◽  
2020 ◽  
Vol 20 (20) ◽  
pp. 5879
Author(s):  
Shih-Feng Huang ◽  
Yung-Hsuan Wen ◽  
Chi-Hsiang Chu ◽  
Chien-Chin Hsu

This study proposes a shape approximation approach to portray the regions of interest (ROI) from medical imaging data. An effective algorithm to achieve an optimal approximation is proposed based on the framework of Particle Swarm Optimization. The convergence of the proposed algorithm is derived under mild assumptions on the selected family of shape equations. The issue of detecting Parkinson’s disease (PD) based on the Tc-99m TRODAT-1 brain SPECT/CT images of 634 subjects, with 305 female and an average age of 68.3 years old from Kaohsiung Chang Gung Memorial Hospital, Taiwan, is employed to demonstrate the proposed procedure by fitting optimal ellipse and cashew-shaped equations in the 2D and 3D spaces, respectively. According to the visual interpretation of 3 experienced board-certified nuclear medicine physicians, 256 subjects are determined to be abnormal, 77 subjects are potentially abnormal, 174 are normal, and 127 are nearly normal. The coefficients of the ellipse and cashew-shaped equations, together with some well-known features of PD existing in the literature, are employed to learn PD classifiers under various machine learning approaches. A repeated hold-out with 100 rounds of 5-fold cross-validation and stratified sampling scheme is adopted to investigate the classification performances of different machine learning methods and different sets of features. The empirical results reveal that our method obtains 0.88 ± 0.04 classification accuracy, 0.87 ± 0.06 sensitivity, and 0.88 ± 0.08 specificity for test data when including the coefficients of the ellipse and cashew-shaped equations. Our findings indicate that more constructive and useful features can be extracted from proper mathematical representations of the 2D and 3D shapes for a specific ROI in medical imaging data, which shows their potential for improving the accuracy of automated PD identification.


Author(s):  
Phawis Thammasorn ◽  
Wanpracha A. Chaovalitwongse ◽  
Daniel S. Hippe ◽  
Landon S. Wootton ◽  
Eric C. Ford ◽  
...  

Author(s):  
Didi-Liliana Popa ◽  
Mihai-Lucian Mocanu ◽  
Radu-Teodoru Popa ◽  
Lucian-Florentin Barbulescu ◽  
Linda Nicoleta Barbulescu ◽  
...  

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