Identification of Gene Regulatory Networks by Integrating Genetic Programming With Particle Filtering

IEEE Access ◽

10.1109/access.2019.2935216 ◽

2019 ◽

Vol 7 ◽

pp. 113760-113770 ◽

Author(s):

Baoshan Ma ◽

Xiangtian Jiao ◽

Fanyu Meng ◽

Fengping Xu ◽

Yao Geng ◽

...

Keyword(s):

Genetic Programming ◽

Gene Regulatory Networks ◽

Particle Filtering ◽

Regulatory Networks ◽

Gene Regulatory

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Inferring parameters of gene regulatory networks via particle filtering

2010 IEEE International Conference on Acoustics, Speech and Signal Processing ◽

10.1109/icassp.2010.5495614 ◽

2010 ◽

Author(s):

Xiaohu Shen ◽

Haris Vikalo

Keyword(s):

Gene Regulatory Networks ◽

Particle Filtering ◽

Regulatory Networks ◽

Gene Regulatory

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Comparing Genetic Programming and Evolution Strategies on Inferring Gene Regulatory Networks

Genetic and Evolutionary Computation – GECCO 2004 - Lecture Notes in Computer Science ◽

10.1007/978-3-540-24854-5_47 ◽

2004 ◽

pp. 471-480 ◽

Author(s):

Felix Streichert ◽

Hannes Planatscher ◽

Christian Spieth ◽

Holger Ulmer ◽

Andreas Zell

Keyword(s):

Genetic Programming ◽

Gene Regulatory Networks ◽

Regulatory Networks ◽

Evolution Strategies ◽

Gene Regulatory

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Gene regulatory networks reconstruction from time series datasets using genetic programming: a comparison between tree-based and graph-based approaches

Genetic Programming and Evolvable Machines ◽

10.1007/s10710-013-9183-z ◽

2013 ◽

Vol 14 (4) ◽

pp. 431-455

Author(s):

Leonardo Vanneschi ◽

Matteo Mondini ◽

Martino Bertoni ◽

Alberto Ronchi ◽

Mattia Stefano

Keyword(s):

Time Series ◽

Genetic Programming ◽

Gene Regulatory Networks ◽

Regulatory Networks ◽

Gene Regulatory

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Dynamic Bayesian network optimized by particle filtering in gene regulatory networks

2010 International Conference on E-Health Networking Digital Ecosystems and Technologies (EDT) ◽

10.1109/edt.2010.5496445 ◽

2010 ◽

Author(s):

Gu Yanli ◽

Jinbao Wang ◽

Han Rumei

Keyword(s):

Bayesian Network ◽

Gene Regulatory Networks ◽

Particle Filtering ◽

Regulatory Networks ◽

Dynamic Bayesian Network ◽

Gene Regulatory

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Gene Regulatory Networks Inference: Combining a Genetic Programming and H∞ Filtering Approach

Applied Statistics for Network Biology ◽

10.1002/9783527638079.ch7 ◽

2011 ◽

pp. 133-153 ◽

Author(s):

Lijun Qian ◽

Haixin Wang ◽

Xiangfang Li

Keyword(s):

Genetic Programming ◽

Gene Regulatory Networks ◽

Regulatory Networks ◽

Gene Regulatory ◽

Filtering Approach

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GeNet: A Graph-Based Genetic Programming Framework for the Reverse Engineering of Gene Regulatory Networks

Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics - Lecture Notes in Computer Science ◽

10.1007/978-3-642-29066-4_9 ◽

2012 ◽

pp. 97-109 ◽

Author(s):

Leonardo Vanneschi ◽

Matteo Mondini ◽

Martino Bertoni ◽

Alberto Ronchi ◽

Mattia Stefano

Keyword(s):

Genetic Programming ◽

Reverse Engineering ◽

Gene Regulatory Networks ◽

Regulatory Networks ◽

Programming Framework ◽

Gene Regulatory

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Automatic inferring drug gene regulatory networks with missing information using neural networks and genetic programming

2008 IEEE International Joint Conference on Neural Networks (IEEE World Congress on Computational Intelligence) ◽

10.1109/ijcnn.2008.4634233 ◽

2008 ◽

Author(s):

Alexandru George Floares

Keyword(s):

Neural Networks ◽

Genetic Programming ◽

Gene Regulatory Networks ◽

Regulatory Networks ◽

Missing Information ◽

Gene Regulatory

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Inference of gene regulatory networks using genetic programming and Kalman filter

2006 IEEE International Workshop on Genomic Signal Processing and Statistics ◽

10.1109/gensips.2006.353139 ◽

2006 ◽

Author(s):

Haixin Wang ◽

Lijun Qian ◽

Edward Dougherty

Keyword(s):

Kalman Filter ◽

Genetic Programming ◽

Gene Regulatory Networks ◽

Regulatory Networks ◽

Gene Regulatory

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Inferring Parameters of Gene Regulatory Networks via Particle Filtering

EURASIP Journal on Advances in Signal Processing ◽

10.1155/2010/204612 ◽

2010 ◽

Vol 2010 (1) ◽

Author(s):

Xiaohu Shen ◽

Haris Vikalo

Keyword(s):

Gene Regulatory Networks ◽

Particle Filtering ◽

Regulatory Networks ◽

Gene Regulatory

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Discovering structures in gene regulatory networks using genetic programming and particle swarms

Proceedings of the 9th annual conference on Genetic and evolutionary computation - GECCO '07 ◽

10.1145/1276958.1277300 ◽

2007 ◽

Author(s):

Xinye Cai ◽

Stephen M. Welch ◽

Praveen Koduru ◽

Sanjoy Das

Keyword(s):

Genetic Programming ◽

Gene Regulatory Networks ◽

Regulatory Networks ◽

Particle Swarms ◽

Gene Regulatory

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