Fast protein network clustering algorithm: a new approach for clustering protein-protein interaction networks to detect functional modules

2013 2nd International Conference on Advances in Electrical Engineering (ICAEE) ◽

10.1109/icaee.2013.6750296 ◽

2013 ◽

Author(s):

Mohammad Shamsur Rahman ◽

Nafisa Chowdhury ◽

Mohammad Shahedul Islam ◽

Md. Mahboob Karim

Keyword(s):

Protein Interaction ◽

Clustering Algorithm ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Network ◽

Network Clustering ◽

Functional Modules ◽

New Approach ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Identification of overlapping protein complexes by fuzzy K-medoids clustering algorithm in yeast protein-protein interaction networks

Journal of Intelligent & Fuzzy Systems ◽

10.3233/jifs-17026 ◽

2018 ◽

Vol 34 (1) ◽

pp. 93-103 ◽

Author(s):

Buwen Cao ◽

Shuguang Deng ◽

Jiawei Luo ◽

Pingjian Ding ◽

Shulin Wang

Keyword(s):

Protein Interaction ◽

Clustering Algorithm ◽

Protein Complexes ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Yeast Protein ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Functional Modules in Protein–Protein Interaction Networks

Systems Biology for Signaling Networks - Systems Biology ◽

10.1007/978-1-4419-5797-9_14 ◽

2010 ◽

pp. 353-369

Author(s):

Tobias Müller ◽

Marcus Dittrich

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Functional Modules ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Identification of Essential Protein based on Functional Modules and Weighted Protein-Protein Interaction Networks

International Journal of u- and e- Service Science and Technology ◽

10.14257/ijunesst.2016.9.8.29 ◽

2016 ◽

Vol 9 (8) ◽

pp. 343-350 ◽

Author(s):

Yi Pan ◽

Sai Hu ◽

Bihai Zhao

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Functional Modules ◽

Essential Protein ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Dynamic identifying protein functional modules based on adaptive density modularity in protein-protein interaction networks

BMC Bioinformatics ◽

10.1186/1471-2105-16-s12-s5 ◽

2015 ◽

Vol 16 (S12) ◽

Author(s):

Xianjun Shen ◽

Li Yi ◽

Yang Yi ◽

Jincai Yang ◽

Tingting He ◽

...

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Functional Modules ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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An improved AP algorithm for identifying overlapping functional modules in protein-protein interaction networks

IEEE 10th INTERNATIONAL CONFERENCE ON SIGNAL PROCESSING PROCEEDINGS ◽

10.1109/icosp.2010.5656663 ◽

2010 ◽

Author(s):

Yu Wang ◽

Lin Gao

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Functional Modules ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Integrative Approach for Detection of Functional Modules from Protein-Protein Interaction Networks

Protein-Protein Interactions - Computational and Experimental Tools ◽

10.5772/37858 ◽

2012 ◽

Author(s):

Zelmina Lubovac

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Integrative Approach ◽

Functional Modules ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Research on Algorithms for Complexes and Functional Modules Prediction in Protein-Protein Interaction Networks

Chinese Journal of Computers ◽

10.3724/sp.j.1016.2011.01239 ◽

2011 ◽

Vol 34 (7) ◽

pp. 1239-1251 ◽

Author(s):

Liang YU ◽

Lin GAO ◽

Peng-Gang SUN

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Functional Modules ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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An Effective Link-based Clustering Algorithm for Detecting Overlapping Protein Complexes in Protein-protein Interaction Networks

IEEE Transactions on Network Science and Engineering ◽

10.1109/tnse.2021.3109880 ◽

2021 ◽

pp. 1-1

Author(s):

Lun Hu ◽

Jun Zhang ◽

Xiangyu Pan ◽

Xin Luo ◽

Huaqiang Yuan

Keyword(s):

Protein Interaction ◽

Clustering Algorithm ◽

Protein Complexes ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Pathway Prediction in Protein–Protein Interaction Networks Based on Hierarchical Clustering Algorithm

Journal of Bionanoscience ◽

10.1166/jbns.2013.1156 ◽

2013 ◽

Vol 7 (4) ◽

pp. 478-483

Author(s):

Shuqin Wang ◽

Yinzhu Li ◽

Peiyan Liu ◽

Jinmao Wei

Keyword(s):

Hierarchical Clustering ◽

Protein Interaction ◽

Clustering Algorithm ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Pathway Prediction ◽

Protein Protein Interaction Networks ◽

Hierarchical Clustering Algorithm

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Erratum to: Functional Modules in Protein–Protein Interaction Networks

Systems Biology for Signaling Networks - Systems Biology ◽

10.1007/978-1-4419-5797-9_35 ◽

2010 ◽

pp. E1-E1

Author(s):

Tobias Müller ◽

Marcus Dittrich

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Functional Modules ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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