Alternative pre-mRNA splicing: factors involved in splice site selection

1994 ◽  
Vol 107 (1) ◽  
pp. 1-7 ◽  
Author(s):  
Pamela A. Norton
2000 ◽  
Vol 74 (19) ◽  
pp. 9002-9009 ◽  
Author(s):  
Magnus Molin ◽  
Göran Akusjärvi

ABSTRACT Expression of cytoplasmic mRNA from most adenovirus transcription units is subjected to a temporal regulation at the level of alternative pre-mRNA splicing. The general tendency is that splice site selection changes from proximal to distal late after infection. Interestingly, ASF/SF2, which is a prototypical member of the SR family of splicing factors, has the opposite effect on splice site selection, inducing an increase in proximal splice site usage. We have previously shown that SR proteins late during an adenovirus infection become partially inactivated as splicing regulatory proteins. A prediction from these results is that overexpression of an SR protein, such as ASF/SF2, during virus growth will interfere with virus replication by disturbing the balance of functional and nonfunctional ASF/SF2 in the infected cell. To test this hypothesis, we reconstructed a recombinant adenovirus expressing ASF/SF2 under the transcriptional control of a regulated promoter. The results show that, as predicted, induction of ASF/SF2 during lytic virus growth prevents the early to late shift in mRNA expression from both early (E1A and E1B) and late (L1) transcription units. Furthermore, ASF/SF2 overexpression blocks viral DNA replication and reduces selectively cytoplasmic accumulation of major late mRNA, resulting in a lower virus yield. Collectively, our results provide additional support for the hypothesis that viral control of SR protein function is important for the proper expression of viral proteins during lytic virus growth.


2002 ◽  
Vol 10 (1) ◽  
pp. 21-33 ◽  
Author(s):  
Bosiljka Tasic ◽  
Christoph E. Nabholz ◽  
Kristin K. Baldwin ◽  
Youngwook Kim ◽  
Erroll H. Rueckert ◽  
...  

Genetics ◽  
1996 ◽  
Vol 143 (2) ◽  
pp. 723-739 ◽  
Author(s):  
James G Umen ◽  
Christine Guthrie

Abstract PRP8 encodes a highly conserved U5 snRNP protein required for spliceosome assembly and later steps of pre-mRNA splicing. We recently identified a novel allele, prp8-101, that specifically impairs recognition of the undine tract that precedes most yeast 3′ slice sites. We carried out extensive mutagenesis of the gene and selected for new alleles that confer a phenotype similar to that of prp8-101. The strongest alleles cause changes in one of two amino acids in the C-terminal portion of the protein. We also identified a second class of PRP8 mutant that affects the fidelity of 3′ splice site utilization. These alleles suppress point mutations in the PyAG motif at the 3′ splice site and do not alter uridine tract recognition. The strongest of these alleles map to a region directly upstream of the pp8-101-like mutations. These new PRP8 alleles define two separable functions of Prp8p, required for specificity of 3′ splice site selection and fidelity of 3′ splice site utilization, respectively. Taken together with other recent biochemical and genetic data, our results suggest that Prp8p plays a functional role at the active site of the spliceosome during the second catalytic step of splicing.


2015 ◽  
Vol 26 (20) ◽  
pp. 3557-3560
Author(s):  
Stephen M. Mount ◽  
Sandra L. Wolin

Thirty-five years ago, as young graduate students, we had the pleasure and privilege of being in Joan Steitz’s laboratory at a pivotal point in the history of RNA molecular biology. Introns had recently been discovered in the laboratories of Philip Sharp and Richard Roberts, but the machinery for removing them from mRNA precursors was entirely unknown. This Retrospective describes our hypothesis that recently discovered snRNPs functioned in pre-mRNA splicing. The proposal was proven correct, as has Joan’s intuition that small RNAs provide specificity to RNA processing reactions through base pairing in diverse settings. However, research over the intervening years has revealed that both splice site selection and splicing itself are much more complex and dynamic than we imagined.


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