An Ensemble Classifier for Eukaryotic Protein Subcellular Location Prediction Using Gene Ontology Categories and Amino Acid Hydrophobicity

PLoS ONE ◽

10.1371/journal.pone.0031057 ◽

2012 ◽

Vol 7 (1) ◽

pp. e31057 ◽

Author(s):

Liqi Li ◽

Yuan Zhang ◽

Lingyun Zou ◽

Changqing Li ◽

Bo Yu ◽

...

Keyword(s):

Gene Ontology ◽

Subcellular Location ◽

Ensemble Classifier ◽

Location Prediction ◽

Eukaryotic Protein ◽

Protein Subcellular Location ◽

Subcellular Location Prediction ◽

Protein Subcellular Location Prediction

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Euk-PLoc: an ensemble classifier for large-scale eukaryotic protein subcellular location prediction

Amino Acids ◽

10.1007/s00726-006-0478-8 ◽

2007 ◽

Vol 33 (1) ◽

pp. 57-67 ◽

Author(s):

H.-B. Shen ◽

J. Yang ◽

K.-C. Chou

Keyword(s):

Large Scale ◽

Subcellular Location ◽

Ensemble Classifier ◽

Location Prediction ◽

Eukaryotic Protein ◽

Protein Subcellular Location ◽

Subcellular Location Prediction ◽

Protein Subcellular Location Prediction

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Protein Subcellular Location Prediction Based on Pseudo Amino Acid Composition and PSI-Blast Profile

Journal of Computational and Theoretical Nanoscience ◽

10.1166/jctn.2015.4272 ◽

2015 ◽

Vol 12 (10) ◽

pp. 3756-3762 ◽

Author(s):

Huimin Xu ◽

Shoujiang Yan ◽

Qi Dai ◽

Ping-An He ◽

Bo Liao ◽

...

Keyword(s):

Amino Acid Composition ◽

Acid Composition ◽

Subcellular Location ◽

Location Prediction ◽

Pseudo Amino Acid Composition ◽

Protein Subcellular Location ◽

Subcellular Location Prediction ◽

Protein Subcellular Location Prediction

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A novel approach for protein subcellular location prediction using amino acid exposure

BMC Bioinformatics ◽

10.1186/1471-2105-14-342 ◽

2013 ◽

Vol 14 (1) ◽

Author(s):

Arvind Singh Mer ◽

Miguel A Andrade-Navarro

Keyword(s):

Subcellular Location ◽

Acid Exposure ◽

Location Prediction ◽

Protein Subcellular Location ◽

Subcellular Location Prediction ◽

Novel Approach ◽

Protein Subcellular Location Prediction

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Hum-mPLoc: An ensemble classifier for large-scale human protein subcellular location prediction by incorporating samples with multiple sites

Biochemical and Biophysical Research Communications ◽

10.1016/j.bbrc.2007.02.071 ◽

2007 ◽

Vol 355 (4) ◽

pp. 1006-1011 ◽

Author(s):

Hong-Bin Shen ◽

Kuo-Chen Chou

Keyword(s):

Large Scale ◽

Subcellular Location ◽

Ensemble Classifier ◽

Human Protein ◽

Location Prediction ◽

Protein Subcellular Location ◽

Subcellular Location Prediction ◽

Protein Subcellular Location Prediction

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Based on Gene Ontology Semantic Similarity Protein Subcellular Location Prediction

Journal of Computational and Theoretical Nanoscience ◽

10.1166/jctn.2015.4409 ◽

2015 ◽

Vol 12 (11) ◽

pp. 4615-4623 ◽

Author(s):

Xiangliang Zhang ◽

Min Jin

Keyword(s):

Gene Ontology ◽

Semantic Similarity ◽

Subcellular Location ◽

Location Prediction ◽

Protein Subcellular Location ◽

Subcellular Location Prediction ◽

Protein Subcellular Location Prediction

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Protein Subcellular Location Prediction Based on Pseudo Amino Acid Composition and Immune Genetic Algorithm

Computational Intelligence and Bioinformatics - Lecture Notes in Computer Science ◽

10.1007/11816102_57 ◽

2006 ◽

pp. 534-542 ◽

Author(s):

Tongliang Zhang ◽

Yongsheng Ding ◽

Shihuang Shao

Keyword(s):

Genetic Algorithm ◽

Amino Acid Composition ◽

Acid Composition ◽

Subcellular Location ◽

Location Prediction ◽

Immune Genetic Algorithm ◽

Protein Subcellular Location ◽

Subcellular Location Prediction ◽

Protein Subcellular Location Prediction

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Euk-mPLoc: A Fusion Classifier for Large-Scale Eukaryotic Protein Subcellular Location Prediction by Incorporating Multiple Sites

Journal of Proteome Research ◽

10.1021/pr060635i ◽

2007 ◽

Vol 6 (5) ◽

pp. 1728-1734 ◽

Author(s):

Kuo-Chen Chou ◽

Hong-Bin Shen

Keyword(s):

Large Scale ◽

Subcellular Location ◽

Location Prediction ◽

Eukaryotic Protein ◽

Protein Subcellular Location ◽

Subcellular Location Prediction ◽

Protein Subcellular Location Prediction

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Large-scale plant protein subcellular location prediction

Journal of Cellular Biochemistry ◽

10.1002/jcb.21096 ◽

2007 ◽

Vol 100 (3) ◽

pp. 665-678 ◽

Author(s):

Kuo-Chen Chou ◽

Hong-Bin Shen

Keyword(s):

Large Scale ◽

Subcellular Location ◽

Plant Protein ◽

Location Prediction ◽

Protein Subcellular Location ◽

Subcellular Location Prediction ◽

Protein Subcellular Location Prediction

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Evolutionary Granular Kernel Trees for Protein Subcellular Location Prediction

Machine Learning in Bioinformatics ◽

10.1002/9780470397428.ch10 ◽

2009 ◽

pp. 229-239

Author(s):

Bo Jin ◽

Yan-Qing Zhang

Keyword(s):

Subcellular Location ◽

Location Prediction ◽

Protein Subcellular Location ◽

Subcellular Location Prediction ◽

Protein Subcellular Location Prediction

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Protein subcellular location prediction using optimally weighted fuzzy k-NN algorithm

Computational Biology and Chemistry ◽

10.1016/j.compbiolchem.2008.07.011 ◽

2008 ◽

Vol 32 (6) ◽

pp. 448-451 ◽

Author(s):

Efendi Nasibov ◽

Cagin Kandemir-Cavas

Keyword(s):

Subcellular Location ◽

Location Prediction ◽

Protein Subcellular Location ◽

Subcellular Location Prediction ◽

Protein Subcellular Location Prediction

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