scholarly journals SSU rDNA Sequence Diversity and Seasonally Differentiated Distribution of Nanoplanktonic Ciliates in Neritic Bohai and Yellow Seas as Revealed by T-RFLP

PLoS ONE ◽  
2014 ◽  
Vol 9 (7) ◽  
pp. e102640 ◽  
Author(s):  
Jun Dong ◽  
Fei Shi ◽  
Han Li ◽  
Xiaoming Zhang ◽  
Xiaozhong Hu ◽  
...  
1998 ◽  
Vol 64 (12) ◽  
pp. 5064-5066 ◽  
Author(s):  
Clifford F. Brunk ◽  
Nicole Eis

ABSTRACT Comparative PCR amplification of small-subunit (SSU) rRNA gene (rDNA) sequences indicates substantial preferential PCR amplification of pJP27 sequences with korarchaeote-specific PCR primers. The coamplification of a modified SSU rDNA sequence can be used as an internal standard to determine the amount of a specific SSU rDNA sequence.


2006 ◽  
Vol 42 (4) ◽  
pp. 943-950 ◽  
Author(s):  
M. Virginia Sanchez-Puerta ◽  
Patricia I. Leonardi ◽  
Charles J. O'Kelly ◽  
Eduardo J. Cáceres

1998 ◽  
Vol 34 (2) ◽  
pp. 286-298 ◽  
Author(s):  
Robert A. Andersen ◽  
Dan Potter ◽  
Robert R. Bidigare ◽  
Mikel Latasa ◽  
Kingsley Rowan ◽  
...  

Parasitology ◽  
2017 ◽  
Vol 145 (8) ◽  
pp. 1105-1117 ◽  
Author(s):  
G.D. Stentiford ◽  
S. Ross ◽  
D. Minardi ◽  
S.W. Feist ◽  
K.S. Bateman ◽  
...  

AbstractWithin aquatic habitats, the hyper-abundant Order Crustacea appear to be the predominant host group for members of the Phylum Microsporidia. The musculature, a common site of infection, provides access to biochemical (carbohydrate-rich) and physiological (mitochondria-rich) conditions conducive to prolific parasite replication and maturation. The significant proportion of body plan devoted to skeletal musculature in Crustacea provides the location for a highly efficient intracellular parasite factory. In this study, we utilize histological, ultrastructural and phylogenetic evidence to describe a previously known (Inodosporus octospora) and novel (Ovipleistophora arlon. sp.) microsporidian parasites infecting the musculature of the common prawn (Palaemon serratus) from the same site, at the same time of year. Despite similar clinical signs of infection, both parasites are otherwise distinct in terms of pathogenesis, morphology and phylogeny. Based upon partial subunit ribosomal RNA (SSU rDNA) sequence, we show that thatI. octosporamay be identical to aKabatanasp. previously described infecting two-spot goby (Gobiusculus flavescens) in Europe, or at least thatInodosporusandKabatanagenera are synonyms. In addition, SSU rDNA sequence forO. arloplaces it within a distinct clade containingOvipleistophora mirandellaeandOvipleistophora ovariae, both infecting the oocytes of freshwater fish in Europe. Taken together, our data provide strong evidence for trophic-transfer between crustacean and fish hosts for two different microsporidians within clade 5 of the phylum. Furthermore, it demonstrates that morphologically and phylogenetically distinct microsporidians can infect the same tissues of the same host species to impart clinical signs which mimic infection with the other.


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