virtual experimentation
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2022 ◽  
Author(s):  
Sarah Chu ◽  
Cameron Johnstone ◽  
Cem Yumuk ◽  
Xiao Wei ◽  
Michael G. Balchanos ◽  
...  

2021 ◽  
pp. 1-27
Author(s):  
Prashant Gupta ◽  
Bhagwan Toksha ◽  
Trishul Kulkarni ◽  
B. Rajaguru ◽  
Abhilasha Mishra

Author(s):  
Genevieve Sullivan ◽  
Claire Zoellner ◽  
Martin Wiedmann ◽  
Renata Ivanek

Food facilities need time- and cost-saving methods during the development and optimization of environmental monitoring for pathogens and their surrogates. Rapid virtual experimentation through in silico modeling can alleviate the need for extensive real-world, trial-and-error style program design. Two agent-based models of fresh-cut produce facilities were developed as a way to simulate dynamics of Listeria in the built environment by modeling the different surfaces of equipment and employees in a facility as agents. Five sampling schemes at three time points were evaluated in silico on their ability to locate presence of Listeria contamination in a facility with sample sites for each scheme based on: (1) facilities’ current environmental monitoring program, (2) Food and Drug Administration recommendations, (3) random selection, (4) sites exclusively from zone 3 (i.e., sites in the production room but not directly adjacent to food-contact surfaces), or (5) model prediction of elevated risk of contamination. Variation was observed between schemes on how well the Listeria prevalence of the virtually collected samples reflected the true prevalence of contaminated agents in the modeled operation. The (4) zone 3- and (5) model-based sampling schemes consistently overestimated true prevalence across time suggesting those schemes could provide a more sensitive approach for determining if there’s Listeria in the operation. The (3) “random” sampling scheme may be more useful for operations looking for a scheme that is most likely to reflect the true prevalence. Overall, the developed models allow for rapid virtual experimentation and evaluation of sampling schemes specific to unique fresh-cut produce facilities. IMPORTANCE Programs such as environmental monitoring are used to determine the state of a given food facility with regards to the presence of environmental pathogens, such as Listeria monocytogenes , that could potentially cross-contaminate food product. However, the design of environmental monitoring programs is complex and there are infinite ways to conduct the sampling that is required for these programs. Experimentally evaluating sampling schemes in a food facility is time-consuming, costly, and nearly impossible. Therefore, the food industry needs science-based tools to aid in developing and refining sampling plans that reduce the risk of harboring contamination. Two agent-based models of two fresh-cut produce facilities reported here demonstrate a novel way to evaluate how different sampling schemes can be rapidly evaluated across multiple time points as a way to understand how sampling can be optimized in an effort to locate the presence of Listeria in a food facility.


2021 ◽  
Vol 18 (6) ◽  
pp. 8149-8173
Author(s):  
Henry Fenekansi Kiwumulo ◽  
◽  
Haruna Muwonge ◽  
Charles Ibingira ◽  
John Baptist Kirabira ◽  
...  

<abstract> <p>Virtual experimentation is a widely used approach for predicting systems behaviour especially in situations where resources for physical experiments are very limited. For example, targeted treatment inside the human body is particularly challenging, and as such, modeling and simulation is utilised to aid planning before a specific treatment is administered. In such approaches, precise treatment, as it is the case in radiotherapy, is used to administer a maximum dose to the infected regions while minimizing the effect on normal tissue. Complicated cancers such as leukemia present even greater challenges due to their presentation in liquid form and not being localised in one area. As such, science has led to the development of targeted drug delivery, where the infected cells can be specifically targeted anywhere in the body.</p> <p>Despite the great prospects and advances of these modeling and simulation tools in the design and delivery of targeted drugs, their use by Low and Middle Income Countries (LMICs) researchers and clinicians is still very limited. This paper therefore reviews the modeling and simulation approaches for leukemia treatment using nanoparticles as an example for virtual experimentation. A systematic review from various databases was carried out for studies that involved cancer treatment approaches through modeling and simulation with emphasis to data collected from LMICs. Results indicated that whereas there is an increasing trend in the use of modeling and simulation approaches, their uptake in LMICs is still limited. According to the review data collected, there is a clear need to employ these tools as key approaches for the planning of targeted drug treatment approaches.</p> </abstract>


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