Methods in Molecular Biology - Biomolecular Simulations
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Published By Springer New York

9781493996070, 9781493996087
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Quantum Chemical and QM/MM Models in Biochemistry

2019 ◽  
pp. 75-104
Author(s):  
Patricia Saura ◽  
Michael Röpke ◽  
Ana P. Gamiz-Hernandez ◽  
Ville R. I. Kaila
Keyword(s):  
Quantum Chemical

Using Data-Reduction Techniques to Analyze Biomolecular Trajectories

2019 ◽  
pp. 453-502 ◽  
Author(s):  
Gareth A. Tribello ◽  
Piero Gasparotto
Keyword(s):  
Data Reduction ◽  
Reduction Techniques ◽  
Using Data

A Practical View of the Martini Force Field

2019 ◽  
pp. 105-127 ◽  
Author(s):  
Bart M. H. Bruininks ◽  
Paulo C. T. Souza ◽  
Siewert J. Marrink
Keyword(s):  
Force Field ◽  
Martini Force Field

Coarse Graining of a Giant Molecular System: The Chromatin Fiber

2019 ◽  
pp. 399-411
Author(s):  
Guido Tiana ◽  
Luca Giorgetti
Keyword(s):  
Molecular System ◽  
Coarse Graining ◽  
Chromatin Fiber

scholarly journals Using SMOG 2 to Simulate Complex Biomolecular Assemblies

2019 ◽  
pp. 129-151
Author(s):  
Mariana Levi ◽  
Prasad Bandarkar ◽  
Huan Yang ◽  
Ailun Wang ◽  
Udayan Mohanty ◽  
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