Using Weeder, Pscan, and PscanChIP for the Discovery of Enriched Transcription Factor Binding Site Motifs in Nucleotide Sequences

2014 ◽  
Vol 47 (1) ◽  
Author(s):  
Federico Zambelli ◽  
Graziano Pesole ◽  
Giulio Pavesi
Keyword(s):  
Transcription Factor ◽  
Binding Site ◽  
Transcription Factor Binding Site ◽  
Transcription Factor Binding ◽  
Nucleotide Sequences ◽  
Factor Binding Site ◽  
Factor Binding

scholarly journals PeakXus: comprehensive transcription factor binding site discovery from ChIP-Nexus and ChIP-Exo experiments

2016 ◽  
Vol 32 (17) ◽  
pp. i629-i638 ◽  
Author(s):  
Tuomo Hartonen ◽  
Biswajyoti Sahu ◽  
Kashyap Dave ◽  
Teemu Kivioja ◽  
Jussi Taipale
Keyword(s):  
Transcription Factor ◽  
Binding Site ◽  
Transcription Factor Binding Site ◽  
Transcription Factor Binding ◽  
Factor Binding Site ◽  
Factor Binding
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