CAE-CNN: Predicting transcription factor binding site with convolutional autoencoder and convolutional neural network

2021 ◽  
pp. 115404
Author(s):  
Yongqing Zhang ◽  
Shaojie Qiao ◽  
Yuanqi Zeng ◽  
Dongrui Gao ◽  
Nan Han ◽  
...  
Keyword(s):  
Neural Network ◽  
Transcription Factor ◽  
Convolutional Neural Network ◽  
Binding Site ◽  
Transcription Factor Binding Site ◽  
Transcription Factor Binding ◽  
Factor Binding Site ◽  
Factor Binding ◽  
Convolutional Autoencoder

scholarly journals PeakXus: comprehensive transcription factor binding site discovery from ChIP-Nexus and ChIP-Exo experiments

2016 ◽  
Vol 32 (17) ◽  
pp. i629-i638 ◽  
Author(s):  
Tuomo Hartonen ◽  
Biswajyoti Sahu ◽  
Kashyap Dave ◽  
Teemu Kivioja ◽  
Jussi Taipale
Keyword(s):  
Transcription Factor ◽  
Binding Site ◽  
Transcription Factor Binding Site ◽  
Transcription Factor Binding ◽  
Factor Binding Site ◽  
Factor Binding
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