Database Integration II

Several visualization tools for the mapping of protein-protein interactions have been developed in recent years. However, a systematic comparison of the virtues and limitations of different PPI visualization tools has not been carried out so far. In this study, we compare seven commonly used visualization tools, based on input and output file format, layout algorithm, database integration, Gene Ontology annotation and accessibility of each tool. The assessment was carried out based on brain disease datasets. Our suggested tools, NAViGaTOR, Cytoscape and Gephi perform competitively as PPI network visualization tools, can be a reference for future researches on PPI mapping and analysis.

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Biological Database Integration

Wiley Encyclopedia of Biomedical Engineering ◽

10.1002/9780471740360.ebs0368 ◽

2006 ◽

Author(s):

Zina Ben Miled ◽

Yang Liu ◽

Nianhua Li ◽

Omran Bukhres

Keyword(s):

Biological Database ◽

Database Integration

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Database integration and visualization of maps of the human genome using the GnomeView interface

Proceedings of the Twenty-Seventh Hawaii International Conference on System Sciences HICSS-94 ◽

10.1109/hicss.1994.323590 ◽

1994 ◽

Cited By ~ 2

Author(s):

Douthart ◽

Pelkey ◽

Thomas

Keyword(s):

Human Genome ◽

Database Integration

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Example 3: Entity EJBs for Database Integration

J2EE FrontEnd Technologies: A Programmer’s Guide to Servlets, JavaServer Pages, and Enterprise JavaBeans ◽

10.1007/978-1-4302-1148-8_11 ◽

2002 ◽

pp. 847-985

Author(s):

Lennart Jörelid

Keyword(s):

Database Integration

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A Database Integration System and an Example of Its Application

Database Reengineering and Interoperability ◽

10.1007/978-1-4615-1803-7_22 ◽

1996 ◽

pp. 297-308

Author(s):

Anne E. James

Keyword(s):

Database Integration ◽

Integration System

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Digital Microscopy for Boosting Database Integration and Analysis in TMA Studies

Methods in Molecular Biology - Tissue Microarrays ◽

10.1007/978-1-60761-806-5_16 ◽

2010 ◽

pp. 163-175 ◽

Cited By ~ 10

Author(s):

Tibor Krenacs ◽

Levente Ficsor ◽

Sebestyen Viktor Varga ◽

Vivien Angeli ◽

Bela Molnar

Keyword(s):

Database Integration ◽

Digital Microscopy

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3D MODELLING AND VISUALIZATION BASED ON THE UNITY GAME ENGINE – ADVANTAGES AND CHALLENGES

ISPRS Annals of Photogrammetry Remote Sensing and Spatial Information Sciences ◽

10.5194/isprs-annals-iv-4-w4-161-2017 ◽

2017 ◽

Vol IV-4/W4 ◽

pp. 161-166 ◽

Cited By ~ 10

Author(s):

I. Buyuksalih ◽

S. Bayburt ◽

G. Buyuksalih ◽

A. P. Baskaraca ◽

H. Karim ◽

...

Keyword(s):

3D Modelling ◽

Database Integration ◽

Game Engine ◽

Implementation Phase ◽

Research Areas ◽

3D City Model ◽

3D Data ◽

Version 2.0 ◽

City Model ◽

Analysis Platform

3D City modelling is increasingly popular and becoming valuable tools in managing big cities. Urban and energy planning, landscape, noise-sewage modelling, underground mapping and navigation are among the applications/fields which really depend on 3D modelling for their effectiveness operations. Several research areas and implementation projects had been carried out to provide the most reliable 3D data format for sharing and functionalities as well as visualization platform and analysis. For instance, BIMTAS company has recently completed a project to estimate potential solar energy on 3D buildings for the whole Istanbul and now focussing on 3D utility underground mapping for a pilot case study. The research and implementation standard on 3D City Model domain (3D data sharing and visualization schema) is based on CityGML schema version 2.0. However, there are some limitations and issues in implementation phase for large dataset. Most of the limitations were due to the visualization, database integration and analysis platform (Unity3D game engine) as highlighted in this paper.

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