Integration of Epigenetic Data in Bayesian Network Modeling of Gene Regulatory Network

Contemporary Biostatistics with Biopharmaceutical Applications - ICSA Book Series in Statistics ◽

Inference of Gene Regulatory Network Through Adaptive Dynamic Bayesian Network Modeling

10.1007/978-3-030-15310-6_5 ◽

2019 ◽

pp. 91-113

Author(s):

Yaqun Wang ◽

Scott A. Berceli ◽

Marc Garbey ◽

Rongling Wu

Keyword(s):

Bayesian Network ◽

Gene Regulatory Network ◽

Regulatory Network ◽

Network Modeling ◽

Adaptive Dynamic ◽

Bayesian Network Modeling ◽

Dynamic Bayesian Network Modeling Based on Structure Prediction for Gene Regulatory Network

IEEE Access ◽

10.1109/access.2021.3109133 ◽

2021 ◽

Vol 9 ◽

pp. 123616-123634

Author(s):

Luxuan Qu ◽

Zhiqiong Wang ◽

Chan Li ◽

Shanghui Guo ◽

Junchang Xin ◽

...

Keyword(s):

Bayesian Network ◽

Gene Regulatory Network ◽

Regulatory Network ◽

Structure Prediction ◽

Network Modeling ◽

Bayesian Network Modeling ◽

Gene regulatory network modeling via global optimization of high-order dynamic Bayesian network

BMC Bioinformatics ◽

10.1186/1471-2105-13-131 ◽

2012 ◽

Vol 13 (1) ◽

pp. 131 ◽

Cited By ~ 31

Author(s):

Nguyen Xuan ◽

Madhu Chetty ◽

Ross Coppel ◽

Pramod P Wangikar

Keyword(s):

Global Optimization ◽

Bayesian Network ◽

Gene Regulatory Network ◽

Regulatory Network ◽

Network Modeling ◽

High Order ◽

2016 IEEE 16th International Conference on Bioinformatics and Bioengineering (BIBE) ◽

A Comparison Study of Reverse Engineering Gene Regulatory Network Modeling

10.1109/bibe.2016.73 ◽

2016 ◽

Author(s):

Charles C. N. Wang ◽

Pei-Chun Chang ◽

Phillip C. Y. Sheu ◽

Jeffrey J. P. Tsai

Keyword(s):

Reverse Engineering ◽

Gene Regulatory Network ◽

Regulatory Network ◽

Network Modeling ◽

Comparison Study ◽

Gene regulatory network modeling using literature curated and high throughput data

Systems and Synthetic Biology ◽

10.1007/s11693-012-9100-4 ◽

2012 ◽

Vol 6 (3-4) ◽

pp. 69-77 ◽

Cited By ~ 3

Author(s):

Vishwesh V. Kulkarni ◽

Reza Arastoo ◽

Anupama Bhat ◽

Kalyansundaram Subramanian ◽

Mayuresh V. Kothare ◽

...

Keyword(s):

Gene Regulatory Network ◽

High Throughput ◽

Regulatory Network ◽

Network Modeling ◽

High Throughput Data ◽

2020 6th International Conference on Big Data Computing and Communications (BIGCOM) ◽

Distributed Local Bayesian Network for Gene Regulatory Network Reconstruction

10.1109/bigcom51056.2020.00026 ◽

2020 ◽

Author(s):

Luxuan Qu ◽

Zhiqiong Wang ◽

Yueyang Huo ◽

Yuezhou Zhou ◽

Junchang Xin ◽

...

Keyword(s):

Bayesian Network ◽

Gene Regulatory Network ◽

Regulatory Network ◽

Network Reconstruction ◽

Network Classification based on Reducibility with respect to the Stability of Canalizing Power of Genes in a Gene Regulatory Network — a Boolean Network Modeling Perspective

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2020.3005313 ◽

2020 ◽

pp. 1-1

Author(s):

Eunji Kim ◽

Ivan Ivanov ◽

Edward Russell Dougherty

Keyword(s):

Gene Regulatory Network ◽

Regulatory Network ◽

Boolean Network ◽

Network Modeling ◽

Gene Regulatory ◽

The Stability

Unconventional systems analysis problems in molecular biology: a case study in gene regulatory network modeling

Computers & Chemical Engineering ◽

10.1016/j.compchemeng.2004.08.016 ◽

2005 ◽

Vol 29 (3) ◽

pp. 547-563 ◽

Cited By ~ 7

Author(s):

Daniel E. Zak ◽

Rajanikanth Vadigepalli ◽

Gregory E. Gonye ◽

Francis J. Doyle ◽

James S. Schwaber ◽

...

Keyword(s):

Molecular Biology ◽

Gene Regulatory Network ◽

Systems Analysis ◽

Regulatory Network ◽

Network Modeling ◽

2011 IEEE International Conference on Signal Processing, Communications and Computing (ICSPCC) ◽

A Bayesian network based algorithm for gene regulatory network reconstruction

10.1109/icspcc.2011.6061811 ◽

2011 ◽

Cited By ~ 2

Author(s):

Bo Yang ◽

Junying Zhang ◽

Junliang Shang ◽

Aimin Li

Keyword(s):

Bayesian Network ◽

Gene Regulatory Network ◽

Regulatory Network ◽

Network Reconstruction ◽

Continuous Dynamic Bayesian Network for gene regulatory network modelling

2014 International Conference on Computational Science and Technology (ICCST) ◽

10.1109/iccst.2014.7045200 ◽

2014 ◽

Author(s):

Norhaini Baba ◽

Mohd Saberi Mohamad ◽

Abdul Hakim Mohamed Salleh ◽

Mohd Hanafi Ahmad Hijazi ◽

Lian En Chai ◽

...

Keyword(s):

Bayesian Network ◽

Gene Regulatory Network ◽

Regulatory Network ◽

Network Modelling ◽

Gene Regulatory ◽

Continuous Dynamic