Mitochondrial DNA: a tool for elucidating molecular phylogenetics and population

2022 ◽  
pp. 27-38
Author(s):  
Monika Sodhi ◽  
Ranbir Chander Sobti ◽  
Manishi Mukesh
The Auk ◽  
2005 ◽  
Vol 122 (4) ◽  
pp. 1191-1209 ◽  
Author(s):  
Jason D. Weckstein

Abstract I reconstructed the phylogeny of 12 Ramphastos toucan taxa using mitochondrial DNA (mtDNA) sequences. This analysis identified two major groups, including a monophyletic smooth-billed yelping clade and a clade including most, but not all, the channel-keel-billed croakers. Within the R. tucanus and R. vitellinus groups, uncorrected mtDNA divergences are relatively low and mtDNA sequences from several subspecies are paraphyletic. One exception to low divergences within the R. vitellinus group is R. v. ariel from southeastern Brazil, which on average differs from all other R. vitellinus sampled by 2.9%. Character reconstructions on the phylogeny indicate that the ancestral Ramphastos was most likely a large-bodied channel- keel-billed croaker. Furthermore, an assessment of the patterns of bill shape, voice, and both plumage and bare-part coloration characters suggests that bill shape and voice have significant phylogenetic signal but that color characters do not. Sympatric Ramphastos taxa are not closely related in the phylogeny; therefore, character reconstructions indicate that the extreme similarity in coloration patterns between many sympatric Ramphastos pairs is most likely attributable to a combination of convergence or parallelism (homoplasy) and shared ancestral character states (symplesiomorphy). Filogenética Molecular de los Tucanes del Género Ramphastos: Implicaciones para la Evolución de la Morfología, las Vocalizaciones y la Coloración


2014 ◽  
Vol 42 (4) ◽  
pp. 873-879 ◽  
Author(s):  
V. S. Basheer ◽  
C. Mohitha ◽  
N. Vineesh ◽  
P. R. Divya ◽  
A. Gopalakrishnan ◽  
...  

2005 ◽  
Vol 37 (1) ◽  
pp. 45-61 ◽  
Author(s):  
Chunhua Wu ◽  
Jianping Wu ◽  
Thomas D. Bunch ◽  
Qingwei Li ◽  
Yingxiang Wang ◽  
...  

Author(s):  
Douglas C. Barker

A number of satisfactory methods are available for the electron microscopy of nicleic acids. These methods concentrated on fragments of nuclear, viral and mitochondrial DNA less than 50 megadaltons, on denaturation and heteroduplex mapping (Davies et al 1971) or on the interaction between proteins and DNA (Brack and Delain 1975). Less attention has been paid to the experimental criteria necessary for spreading and visualisation by dark field electron microscopy of large intact issociations of DNA. This communication will report on those criteria in relation to the ultrastructure of the (approx. 1 x 10-14g) DNA component of the kinetoplast from Trypanosomes. An extraction method has been developed to eliminate native endonucleases and nuclear contamination and to isolate the kinetoplast DNA (KDNA) as a compact network of high molecular weight. In collaboration with Dr. Ch. Brack (Basel [nstitute of Immunology), we studied the conditions necessary to prepare this KDNA Tor dark field electron microscopy using the microdrop spreading technique.


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