Multi-objectivization, fitness landscape transformation and search performance: A case of study on the hp model for protein structure prediction

Mario Garza-Fabre; Gregorio Toscano-Pulido; Eduardo Rodriguez-Tello

doi:10.1016/j.ejor.2014.06.009

Multi-objectivization, fitness landscape transformation and search performance: A case of study on the hp model for protein structure prediction

European Journal of Operational Research ◽

10.1016/j.ejor.2014.06.009 ◽

2015 ◽

Vol 243 (2) ◽

pp. 405-422 ◽

Cited By ~ 9

Author(s):

Mario Garza-Fabre ◽

Gregorio Toscano-Pulido ◽

Eduardo Rodriguez-Tello

Keyword(s):

Protein Structure ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Fitness Landscape ◽

Search Performance ◽

Hp Model ◽

Landscape Transformation

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Protein Structure Prediction Based on HP Model Using an Improved Hybrid EDA

Evolutionary Learning and Optimization - Exploitation of Linkage Learning in Evolutionary Algorithms ◽

10.1007/978-3-642-12834-9_9 ◽

2010 ◽

pp. 193-214 ◽

Cited By ~ 2

Author(s):

Benhui Chen ◽

Jinglu Hu

Keyword(s):

Protein Structure ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Hp Model

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Study of fitness landscapes for the hp model of protein structure prediction

The 2003 Congress on Evolutionary Computation, 2003. CEC '03. ◽

10.1109/cec.2003.1299380 ◽

2004 ◽

Cited By ~ 5

Author(s):

S.D. Flores ◽

J. Smith

Keyword(s):

Protein Structure ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Fitness Landscapes ◽

Hp Model

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Comparing alternative energy functions for the HP model of protein structure prediction

2011 IEEE Congress of Evolutionary Computation (CEC) ◽

10.1109/cec.2011.5949902 ◽

2011 ◽

Cited By ~ 4

Author(s):

Mario Garza-Fabre ◽

Eduardo Rodriguez-Tello ◽

Gregorio Toscano-Pulido

Keyword(s):

Protein Structure ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Alternative Energy ◽

Energy Functions ◽

Hp Model

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Protein structure prediction in the 3D HP model

2009 IEEE/ACS International Conference on Computer Systems and Applications ◽

10.1109/aiccsa.2009.5069408 ◽

2009 ◽

Cited By ~ 4

Author(s):

Fatima Kanj ◽

Nashat Mansour ◽

Hassan Khachfe ◽

Faisal Abu-Khzam

Keyword(s):

Protein Structure ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Hp Model

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An Improved Multiobjectivization Strategy for HP Model-Based Protein Structure Prediction

Lecture Notes in Computer Science - Parallel Problem Solving from Nature - PPSN XII ◽

10.1007/978-3-642-32964-7_9 ◽

2012 ◽

pp. 82-92 ◽

Cited By ~ 2

Author(s):

Mario Garza-Fabre ◽

Eduardo Rodriguez-Tello ◽

Gregorio Toscano-Pulido

Keyword(s):

Protein Structure ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Hp Model ◽

Model Based

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Enhanced Genetic Algorithm for Protein Structure Prediction based on the HP Model

Search Algorithms and Applications ◽

10.5772/15796 ◽

2011 ◽

Cited By ~ 4

Author(s):

Nashat Mansour ◽

Fatima Kanj ◽

Hassan Khachfe

Keyword(s):

Genetic Algorithm ◽

Protein Structure ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Hp Model

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A local landscape mapping method for protein structure prediction in the HP model

Natural Computing ◽

10.1007/s11047-014-9427-8 ◽

2014 ◽

Vol 13 (3) ◽

pp. 309-319 ◽

Cited By ~ 1

Author(s):

Andrea G. Citrolo ◽

Giancarlo Mauri

Keyword(s):

Protein Structure ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Mapping Method ◽

Hp Model ◽

Landscape Mapping

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Protein structure prediction in the HP model using scatter search algorithm

2020 4th International Symposium on Informatics and its Applications (ISIA) ◽

10.1109/isia51297.2020.9416554 ◽

2020 ◽

Author(s):

Boumedine Nabil ◽

Bouroubi Sadek

Keyword(s):

Protein Structure ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Search Algorithm ◽

Scatter Search ◽

Hp Model ◽

Scatter Search Algorithm

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A Hybrid Monte Carlo Ant Colony Optimization Approach for Protein Structure Prediction in the HP Model

Electronic Proceedings in Theoretical Computer Science ◽

10.4204/eptcs.130.9 ◽

2013 ◽

Vol 130 ◽

pp. 61-69 ◽

Cited By ~ 2

Author(s):

Andrea G. Citrolo ◽

Giancarlo Mauri

Keyword(s):

Monte Carlo ◽

Protein Structure ◽

Ant Colony Optimization ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Ant Colony ◽

Optimization Approach ◽

Hybrid Monte Carlo ◽

Hp Model

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Differential Evolution for Protein Structure Prediction Using the HP Model

Lecture Notes in Computer Science - Foundations on Natural and Artificial Computation ◽

10.1007/978-3-642-21344-1_34 ◽

2011 ◽

pp. 323-333 ◽

Cited By ~ 16

Author(s):

J. Santos ◽

M. Diéguez

Keyword(s):

Protein Structure ◽

Differential Evolution ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Hp Model

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