Complete genome sequence and comparative genome analysis of the Paenibacillus mucilaginosus K02

2016 ◽  
Vol 93 ◽  
pp. 194-203 ◽  
Author(s):  
Bo Xiao ◽  
Yu-Fang Sun ◽  
Bin Lian ◽  
Tian-Ming Chen
Keyword(s):  
Genome Sequence ◽  
Genome Analysis ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Comparative Genome Analysis ◽  
Comparative Genome ◽  
Paenibacillus Mucilaginosus

scholarly journals Complete Genome Sequence of the Giant Virus OBP and Comparative Genome Analysis of the Diverse  KZ-Related Phages

2011 ◽  
Vol 86 (3) ◽  
pp. 1844-1852 ◽  
Author(s):  
A. Cornelissen ◽  
S. C. Hardies ◽  
O. V. Shaburova ◽  
V. N. Krylov ◽  
W. Mattheus ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Analysis ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Giant Virus ◽  
Comparative Genome Analysis ◽  
Comparative Genome

Complete genome sequence and comparative genome analysis of Streptococcus parauberis KCTC11980

2015 ◽  
Vol 37 (11) ◽  
pp. 959-968
Author(s):  
Jung Soo Seo ◽  
Mun Gyeong Kwon ◽  
Jee Youn Hwang ◽  
Sung Hee Jung ◽  
Hyun Ja Han ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Analysis ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Comparative Genome Analysis ◽  
Comparative Genome ◽  
Streptococcus Parauberis

scholarly journals Complete Genome Sequence of a High Lipid-Producing Strain of Mucor circinelloides WJ11 and Comparative Genome Analysis with a Low Lipid-Producing Strain CBS 277.49

PLoS ONE ◽  
2015 ◽  
Vol 10 (9) ◽  
pp. e0137543 ◽  
Author(s):  
Xin Tang ◽  
Lina Zhao ◽  
Haiqin Chen ◽  
Yong Q. Chen ◽  
Wei Chen ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Analysis ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Mucor Circinelloides ◽  
Comparative Genome Analysis ◽  
Comparative Genome ◽  
High Lipid

scholarly journals Comparative Genome Analysis of a Pathogenic Erysipelothrix rhusiopathiae Isolate WH13013 from Pig Reveals Potential Genes Involve in Bacterial Adaptions and Pathogenesis

2020 ◽  
Vol 7 (2) ◽  
pp. 74
Author(s):  
Longsheng Yang ◽  
Yongwei Zhu ◽  
Zhong Peng ◽  
Yi Ding ◽  
Kai Jie ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Analysis ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Erysipelothrix Rhusiopathiae ◽  
Comparative Genome Analysis ◽  
Circular Chromosome ◽  
Comparative Genome ◽  
Virulent Strains ◽  
Core Genes

Erysipelothrix rhusiopathiae is a common pathogen responsible for pig erysipelas. However, the molecular basis for the pathogenesis of E. rhusiopathiae remains to be elucidated. In this study, the complete genome sequence of the E. rhusiopathiae strain WH13013, a pathogenic isolate from a diseased pig, was generated using a combined strategy of PacBio RSII and Illumina sequencing technologies. The strategy finally generated a single circular chromosome of approximately 1.78 Mb in size for the complete genome of WH13013, with an average GC content of 36.49%. The genome of WH13013 encoded 1633 predicted proteins, 55 tRNAs, as well as 15 rRNAs. It contained four genomic islands and several resistance-associated genes were identified within these islands. Phylogenetic analysis revealed that WH13013 was close to many other sequenced E. rhusiopathiae virulent strains. The comprehensive comparative analysis of eight E. rhusiopathiae virulent strains, including WH13013, identified a total of 1184 core genes. A large proportion (approximately 75.31%) of these core genes participated in nutrition and energy uptake and metabolism as well as the other bioactivities that are necessary for bacterial survival and adaption. The core genes also contained those encoding proteins participating in the biosynthesis and/or the components of the proposed virulence factors of E. rhusiopathiae, including the capsule (cpsA, cpsB, cpsC), neuraminidase (nanH), hyaluronidase (hylA, hylB, hylC), and surface proteins (spaA, rspA, rspB). The obtaining of the complete genome sequence of this virulent strain, WH13013, and this comprehensive comparative genome analysis will help in further studies of the genetic basis of the pathogenesis of E. rhusiopathiae.

scholarly journals The Complete Genome Sequence and Comparative Genome Analysis of the High Pathogenicity Yersinia enterocolitica Strain 8081

PLoS Genetics ◽  
2006 ◽  
Vol 2 (12) ◽  
pp. e206 ◽  
Author(s):  
Nicholas R. Thomson ◽  
Sarah Howard ◽  
Brendan W. Wren ◽  
Matthew T. G. Holden ◽  
Lisa Crossman ◽  
...  
Keyword(s):  
Yersinia Enterocolitica ◽  
Genome Sequence ◽  
Genome Analysis ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Comparative Genome Analysis ◽  
Enterocolitica Strain ◽  
Comparative Genome ◽  
High Pathogenicity

scholarly journals Complete Genome Sequence of Borrelia afzelii K78 and Comparative Genome Analysis

PLoS ONE ◽  
2015 ◽  
Vol 10 (3) ◽  
pp. e0120548 ◽  
Author(s):  
Wolfgang Schüler ◽  
Ignas Bunikis ◽  
Jacqueline Weber-Lehman ◽  
Pär Comstedt ◽  
Sabrina Kutschan-Bunikis ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Analysis ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Comparative Genome Analysis ◽  
Comparative Genome ◽  
Borrelia Afzelii

Complete genome sequence and comparative genome analysis of a new special Yersinia enterocolitica

2016 ◽  
Vol 198 (7) ◽  
pp. 673-687 ◽  
Author(s):  
Guoxiang Shi ◽  
Mingming Su ◽  
Junrong Liang ◽  
Ran Duan ◽  
Wenpeng Gu ◽  
...  
Keyword(s):  
Yersinia Enterocolitica ◽  
Genome Sequence ◽  
Genome Analysis ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Comparative Genome Analysis ◽  
Comparative Genome

scholarly journals Complete genome sequence and comparative genome analysis of Klebsiella oxytoca HKOPL1 isolated from giant panda feces

2014 ◽  
Vol 7 (1) ◽  
pp. 827 ◽  
Author(s):  
Jingwei Jiang ◽  
Hein Tun ◽  
Nathalie Mauroo ◽  
Angel Po Ma ◽  
San Chan ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Analysis ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Giant Panda ◽  
Klebsiella Oxytoca ◽  
Comparative Genome Analysis ◽  
Comparative Genome
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