Solution Structure of a DNA Dodecamer Containing the Anti-Neoplastic Agent Arabinosylcytosine: Combined Use of NMR, Restrained Molecular Dynamics, and Full Relaxation Matrix Refinement

Solution Structure of a DNA Decamer Containing the Antiviral Drug Ganciclovir: Combined Use of NMR, Restrained Molecular Dynamics, and Full Relaxation Matrix Refinement‡

Biochemistry ◽

10.1021/bi962604e ◽

1997 ◽

Vol 36 (18) ◽

pp. 5336-5345 ◽

Cited By ~ 18

Author(s):

Matthew Foti ◽

Stephen Marshalko ◽

Eric Schurter ◽

Surat Kumar ◽

G. Peter Beardsley ◽

...

Keyword(s):

Molecular Dynamics ◽

Solution Structure ◽

Antiviral Drug ◽

Relaxation Matrix ◽

Combined Use ◽

Full Relaxation ◽

Relaxation Matrix Refinement ◽

Structure of a DNA Duplex Containing a Single 2‘-O-Methyl-β-d-araT: Combined Use of NMR, Restrained Molecular Dynamics, and Full Relaxation Matrix Refinement

Bioconjugate Chemistry ◽

10.1021/bc960061f ◽

1996 ◽

Vol 7 (6) ◽

pp. 680-688 ◽

Cited By ~ 7

Author(s):

Charlotte H. Gotfredsen ◽

H. Peter Spielmann ◽

Jesper Wengel ◽

Jens Peter Jacobsen

Keyword(s):

Molecular Dynamics ◽

Dna Duplex ◽

Relaxation Matrix ◽

Combined Use ◽

Full Relaxation ◽

Relaxation Matrix Refinement ◽

The solution structure of motilin from NMR distance constraints, distance geometry, molecular dynamics, and an iterative full relaxation matrix refinement

Biochemistry ◽

10.1021/bi00111a012 ◽

1991 ◽

Vol 30 (47) ◽

pp. 11271-11279 ◽

Cited By ~ 21

Author(s):

S. Edmondson ◽

N. Khan ◽

J. Shriver ◽

J. Zdunek ◽

A. Graeslund

Keyword(s):

Molecular Dynamics ◽

Solution Structure ◽

Distance Geometry ◽

Distance Constraints ◽

Relaxation Matrix ◽

Full Relaxation ◽

Relaxation Matrix Refinement

Refinement of the solution structure of the DNA dodecamer 5'd(CGCGPATTCGCG)2 containing a stable purine-thymine base pair: combined use of nuclear magnetic resonance and restrained molecular dynamics

Biochemistry ◽

10.1021/bi00411a042 ◽

1988 ◽

Vol 27 (11) ◽

pp. 4185-4197 ◽

Cited By ~ 32

Author(s):

G. Marius Clore ◽

Hartmut Oschkinat ◽

Larry W. McLaughlin ◽

Fritz Benseler ◽

Claudia Scalfi Happ ◽

...

Keyword(s):

Molecular Dynamics ◽

Magnetic Resonance ◽

Base Pair ◽

Solution Structure ◽

Combined Use ◽

Dna Dodecamer ◽

Refinement of the solution structure of the DNA decamer 5'd(CTGGATCCAG)2: combined use of nuclear magnetic resonance and restrained molecular dynamics

Biochemistry ◽

10.1021/bi00386a069 ◽

1987 ◽

Vol 26 (12) ◽

pp. 3734-3744 ◽

Cited By ~ 48

Author(s):

Michael Nilges ◽

G. Marius Clore ◽

Angela M. Gronenborn ◽

Norbert Piel ◽

Larry W. McLaughlin

Keyword(s):

Molecular Dynamics ◽

Magnetic Resonance ◽

Solution Structure ◽

Combined Use ◽

Refinement of the solution structure of the DNA hexamer 5'd(GCATGC)2: combined use of nuclear magnetic resonance and restrained molecular dynamics

Biochemistry ◽

10.1021/bi00386a068 ◽

1987 ◽

Vol 26 (12) ◽

pp. 3718-3733 ◽

Cited By ~ 64

Author(s):

Michael Nilges ◽

G. Marius Clore ◽

Angela M. Gronenborn ◽

Axel T. Brunger ◽

Martin Karplus ◽

...

Keyword(s):

Molecular Dynamics ◽

Magnetic Resonance ◽

Solution Structure ◽

Combined Use ◽

The solution structure of DNA decamer duplex containing the Dewar product of thymidylyl(3′→5′)thymidine by NMR and full relaxation matrix refinement

FEBS Letters ◽

10.1016/s0014-5793(98)00508-0 ◽

1998 ◽

Vol 428 (3) ◽

pp. 269-274 ◽

Cited By ~ 10

Author(s):

Joon-Hwa Lee ◽

Geum-Sook Hwang ◽

Jong-Ki Kim ◽

Byong-Seok Choi

Keyword(s):

Solution Structure ◽

Relaxation Matrix ◽

Full Relaxation ◽

Relaxation Matrix Refinement

Refinement of the solution structure of the ribonucleotide 5'r(GCAUGC)2: combined use of nuclear magnetic resonance and restrained molecular dynamics

Biochemistry ◽

10.1021/bi00405a053 ◽

1988 ◽

Vol 27 (5) ◽

pp. 1735-1743 ◽

Cited By ~ 20

Author(s):

Claudia Scalfi Happ ◽

Erwin Happ ◽

Michael Nilges ◽

Angela M. Gronenborn ◽

G. Marius Clore

Keyword(s):

Molecular Dynamics ◽

Magnetic Resonance ◽

Solution Structure ◽

Combined Use ◽

Refinement of the solution structure of the RNA-DNA hybrid 5′-[r(GCA)d(TGC)]2 Combined use of nuclear magnetic resonance and restrained molecular dynamics

FEBS Letters ◽

10.1016/0014-5793(88)80286-2 ◽

1988 ◽

Vol 236 (1) ◽

pp. 62-70 ◽

Cited By ~ 4

Author(s):

Claudia Scalfi Happ ◽

Erwin Happ ◽

G.Marius Clore ◽

Angela M. Gronenborn

Keyword(s):

Molecular Dynamics ◽

Magnetic Resonance ◽

Solution Structure ◽

Combined Use ◽

REFINED SOLUTION STRUCTURE OF Al3+-THYMULIN COMPLEXES BASED ON RESTRAINED MOLECULAR DYNAMICS CALCULATIONS

Main Group Metal Chemistry ◽

10.1515/mgmc.1997.20.12.767 ◽

1997 ◽

Vol 20 (12) ◽

Author(s):

Jean-Pierre Laussac ◽

Philippe Arnaud ◽

Piotr Orlewski ◽

Manh-Thong Cung

Keyword(s):

Molecular Dynamics ◽

Solution Structure ◽

Molecular Dynamics Calculations ◽