Identification of Novel Inhibitors of the SARS Coronavirus Main Protease 3CLpro†

Biochemistry ◽  
2004 ◽  
Vol 43 (17) ◽  
pp. 4906-4912 ◽  
Author(s):  
Usman Bacha ◽  
Jennifer Barrila ◽  
Adrian Velazquez-Campoy ◽  
Stephanie A. Leavitt ◽  
Ernesto Freire
ChemBioChem ◽  
2006 ◽  
Vol 7 (7) ◽  
pp. 1048-1055 ◽  
Author(s):  
Samer I. Al‐Gharabli ◽  
Syed T. Ali Shah ◽  
Steffen Weik ◽  
Marco F. Schmidt ◽  
Jeroen R. Mesters ◽  
...  

2021 ◽  
Author(s):  
Tek Narsingh Malla ◽  
Suraj Pandey ◽  
Ishwor Poudyal ◽  
Luis Aldama ◽  
Dennis Feliz ◽  
...  

There is an urgent need for anti-viral agents that treat and/or prevent Covid-19 caused by SARS-Coronavirus (CoV-2) infections. The replication of the SARS CoV-2 is dependent on the activity of two cysteine proteases, a papain-like protease, PL-pro, and the 3C-like protease known as main protease Mpro or 3CLpro. The shortest and the safest path to clinical use is the repurposing of drugs with binding affinity to PLpro or 3CLpro that have an established safety profile in humans. Several studies have reported crystal structures of SARS-CoV-2 main protease in complex with FDA approved drugs such as those used in treatment of hepatitis C. Here, we report the crystal structure of 3CLpro in complex Vitamin C (L-ascorbate) bound to the protein's active site at 2.5 Angstrom resolution. We also demonstrate that L-ascorbate inhibits the 3CLpro in vitro at mmol/L concentrations. The crystal structure of the Vitamin C 3CLpro complex may aid future studies on the effect of Vitamin C not only on the coronavirus main protease but on related proteases of other infectious viruses. Since ascorbate is readily available, as an over-the-counter vitamin supplement, our results have the potential for development of a global and inexpensive antiviral treatment.


2020 ◽  
Vol 15 (6) ◽  
pp. 359-368 ◽  
Author(s):  
Xiaopeng Hu ◽  
Xin Cai ◽  
Xun Song ◽  
Chenyang Li ◽  
Jia Zhao ◽  
...  

Aim: SARS-coronavirus 2 main protease (Mpro) and host toll-like receptors (TLRs) were targeted to screen potential inhibitors among traditional antiviral medicinal plants. Materials & methods: LeDock software was adopted to determine the binding energy between candidate molecules and selected protein pockets. Enrichment analyses were applied to illustrate potential pharmacology networks of active molecules. Results: The citrus flavonoid rutin was identified to fit snugly into the Mpro substrate-binding pocket and to present a strong interaction with TLRs TLR2, TLR6 and TLR7. One-carbon metabolic process and nitrogen metabolism ranked high as potential targets toward rutin. Conclusion: Rutin may influence viral functional protein assembly and host inflammatory suppression. Its affinity for Mpro and TLRs render rutin a potential novel therapeutic anti-coronavirus strategy.


2011 ◽  
Vol 92 (2) ◽  
pp. 204-212 ◽  
Author(s):  
Lili Zhu ◽  
Shyla George ◽  
Marco F. Schmidt ◽  
Samer I. Al-Gharabli ◽  
Jörg Rademann ◽  
...  

ChemMedChem ◽  
2021 ◽  
Author(s):  
C. S. Brian Chia ◽  
Weijun Xu ◽  
Pearly Shuyi Ng

2005 ◽  
Vol 61 (a1) ◽  
pp. c235-c236
Author(s):  
T.-W. Lee ◽  
M. M. Cherney ◽  
C. Huitema ◽  
J. Liu ◽  
L. D. Eltis ◽  
...  

2020 ◽  
Author(s):  
Tek Narsingh Malla ◽  
Suraj Pandey ◽  
Ishwor Poudyal ◽  
Denisse Feliz ◽  
Moraima Noda ◽  
...  

AbstractThe SARS coronavirus 2 main protease 3CLpro tailor cuts various essential virus proteins out of long poly-protein translated from the virus RNA. If the 3CLpro is inhibited, the functional virus proteins cannot form and the virus cannot replicate and assemble. Any compound that inhibits the 3CLpro is therefore a potential drug to end the pandemic. Here we show that the diffraction power of 3CLpro crystals is effectively destroyed by Ebselen. It appears that Ebselen may be a widely available, relatively cost effective way to eliminate the SARS coronavirus 2.


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