Protein uptake into individual hydrogel microspheres visualized by high-speed atomic force microscopy

2019 ◽  
Vol 55 (68) ◽  
pp. 10064-10067 ◽  
Author(s):  
Shusuke Matsui ◽  
Kensuke Hosho ◽  
Haruka Minato ◽  
Takayuki Uchihashi ◽  
Daisuke Suzuki

The moment of protein uptake into hydrogel microspheres (microgels) was directly monitored at the nanoscale by high-speed atomic force microscopy, and suitable design of microgels to suppress the aggregation in the presence of proteins was found.

2019 ◽  
Vol 131 (26) ◽  
pp. 8901-8905 ◽  
Author(s):  
Yuichiro Nishizawa ◽  
Shusuke Matsui ◽  
Kenji Urayama ◽  
Takuma Kureha ◽  
Mitsuhiro Shibayama ◽  
...  

RSC Advances ◽  
2021 ◽  
Vol 11 (22) ◽  
pp. 13130-13137
Author(s):  
Yuichiro Nishizawa ◽  
Haruka Minato ◽  
Takumi Inui ◽  
Ikuma Saito ◽  
Takuma Kureha ◽  
...  

Nanostructure and thermoresponsiveness of single and packed poly(N-isopropyl methacrylamide)-based microgels observed by temperature-controllable high speed atomic force microscopy.


2021 ◽  
Vol 4 (1) ◽  
Author(s):  
Rina Hirano ◽  
Yasuhiro Arimura ◽  
Tomoya Kujirai ◽  
Mikihiro Shibata ◽  
Aya Okuda ◽  
...  

AbstractH2A.B is an evolutionarily distant histone H2A variant that accumulates on DNA repair sites, DNA replication sites, and actively transcribing regions in genomes. In cells, H2A.B exchanges rapidly in chromatin, but the mechanism has remained enigmatic. In the present study, we found that the H2A.B-H2B dimer incorporated within the nucleosome exchanges with the canonical H2A-H2B dimer without assistance from additional factors, such as histone chaperones and nucleosome remodelers. High-speed atomic force microscopy revealed that the H2A.B nucleosome, but not the canonical H2A nucleosome, transiently forms an intermediate “open conformation”, in which two H2A.B-H2B dimers may be detached from the H3-H4 tetramer and bind to the DNA regions near the entry/exit sites. Mutational analyses revealed that the H2A.B C-terminal region is responsible for the adoption of the open conformation and the H2A.B-H2B exchange in the nucleosome. These findings provide mechanistic insights into the histone exchange of the H2A.B nucleosome.


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