Auto‐ and Cross‐Correlation Functions Used as Tools for Information Retrieval in Electron Diffraction Structure Studies

1965 ◽  
Vol 42 (2) ◽  
pp. 587-596 ◽  
Author(s):  
M. Traetteberg ◽  
R. A. Bonham
Author(s):  
William F. Tivol ◽  
Murray Vernon King ◽  
D. F. Parsons

Feasibility of isomorphous substitution in electron diffraction is supported by a calculation of the mean alteration of the electron-diffraction structure factors for hemoglobin crystals caused by substituting two mercury atoms per molecule, following Green, Ingram & Perutz, but with allowance for the proportionality of f to Z3/4 for electron diffraction. This yields a mean net change in F of 12.5%, as contrasted with 22.8% for x-ray diffraction.Use of the hydration chamber in electron diffraction opens prospects for examining many proteins that yield only very thin crystals not suitable for x-ray diffraction. Examination in the wet state avoids treatments that could cause translocation of the heavy-atom labels or distortion of the crystal. Combined with low-fluence techniques, it enables study of the protein in a state as close to native as possible.We have undertaken a study of crystals of rat hemoglobin by electron diffraction in the wet state. Rat hemoglobin offers a certain advantage for hydration-chamber work over other hemoglobins in that it can be crystallized from distilled water instead of salt solutions.


2019 ◽  
Author(s):  
Carmen Guguta ◽  
Jan M.M. Smits ◽  
Rene de Gelder

A method for the determination of crystal structures from powder diffraction data is presented that circumvents the difficulties associated with separate indexing. For the simultaneous optimization of the parameters that describe a crystal structure a genetic algorithm is used together with a pattern matching technique based on auto and cross correlation functions.<br>


2021 ◽  
Vol 51 (1) ◽  
Author(s):  
Hyeongsub So ◽  
Ro Woon Lee ◽  
Sung Taek Hong ◽  
Kyou-Hyun Kim

AbstractWe investigate the sensitivity of symmetry quantification algorithms based on the profile R-factor (Rp) and the normalized cross-correlation (NCC) coefficient (γ). A DM (Digital Micrograph©) script embedded in the Gatan digital microscopy software is used to develop the symmetry quantification program. Using the Bloch method, a variety of CBED patterns are simulated and used to investigate the sensitivity of symmetry quantification algorithms. The quantification results show that two symmetry quantification coefficients are significantly sensitive to structural changes even for small strain values of < 1%.


2016 ◽  
Vol 62 (4) ◽  
pp. 436-446 ◽  
Author(s):  
V. V. Goncharov ◽  
A. S. Shurup ◽  
O. A. Godin ◽  
N. A. Zabotin ◽  
A. I. Vedenev ◽  
...  

At the beginning of 1969 an elaborate programme of E-layer drift measurements was started at De Bilt. The closely spaced receiver method is being used in combination with an on-line analogue computer which plots the polarity-, auto- and cross-correlation functions of the fading signals. The following results over 1969 and a part of 1970 are presented and discussed: mean hourly values of the N and E components for each month; harmonic analysis and prevailing winds, comparison between results obtained from the intersection of the correlation curves and from the time shifts for maximum cross-correlation; and comparison with the results from other stations at about the same latitude.


1983 ◽  
Vol 78 (6) ◽  
pp. 3981-3989 ◽  
Author(s):  
J. T. Muckerman ◽  
D. W. Noid ◽  
M.S. Child

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