scholarly journals A permissive secondary structure-guided superposition tool for clustering of protein fragments toward protein structure prediction via fragment assembly

2006 ◽  
Vol 22 (11) ◽  
pp. 1343-1352 ◽  
Author(s):  
Gilad Wainreb ◽  
Nurit Haspel ◽  
Haim J. Wolfson ◽  
Ruth Nussinov
Keyword(s):  
Protein Structure ◽  
Secondary Structure ◽  
Protein Structure Prediction ◽  
Structure Prediction ◽  
Protein Fragments ◽  
Fragment Assembly

scholarly journals Protein Structure Prediction: Assembly of Secondary Structure Elements by Basin-Hopping

ChemPhysChem ◽  
2014 ◽  
Vol 15 (15) ◽  
pp. 3378-3390 ◽  
Author(s):  
Falk Hoffmann ◽  
Ioan Vancea ◽  
Sanjay G. Kamat ◽  
Birgit Strodel
Keyword(s):  
Protein Structure ◽  
Secondary Structure ◽  
Protein Structure Prediction ◽  
Structure Prediction ◽  
Basin Hopping

scholarly journals The dual role of fragments in fragment-assembly methods for de novo protein structure prediction

2011 ◽  
Vol 80 (2) ◽  
pp. 490-504 ◽  
Author(s):  
Julia Handl ◽  
Joshua Knowles ◽  
Robert Vernon ◽  
David Baker ◽  
Simon C. Lovell
Keyword(s):  
Protein Structure ◽  
Protein Structure Prediction ◽  
Structure Prediction ◽  
De Novo ◽  
Dual Role ◽  
Fragment Assembly
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