SQUINT: a multiple alignment program and editor

M. G. Goode; A. G. Rodrigo

doi:10.1093/bioinformatics/btm128

SQUINT: a multiple alignment program and editor

Bioinformatics ◽

10.1093/bioinformatics/btm128 ◽

2007 ◽

Vol 23 (12) ◽

pp. 1553-1555 ◽

Cited By ~ 16

Author(s):

M. G. Goode ◽

A. G. Rodrigo

Keyword(s):

Multiple Alignment ◽

Alignment Program

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Speeding Up the DIALIGN Multiple Alignment Program by Using the ‘Greedy Alignment of BIOlogical Sequences LIBrary’ (GABIOS-LIB)

Computational Biology - Lecture Notes in Computer Science ◽

10.1007/3-540-45727-5_1 ◽

2001 ◽

pp. 1-11 ◽

Cited By ~ 4

Author(s):

Saïd Abdeddaïm ◽

Burkhard Morgenstern

Keyword(s):

Multiple Alignment ◽

Biological Sequences ◽

Alignment Program

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Positive and negative regulatory elements of the rabbit embryonic ϵ-globin gene revealed by an improved multiple alignment program and functional analysis

DNA Sequence ◽

10.3109/10425179309015629 ◽

1993 ◽

Vol 4 (3) ◽

pp. 163-176 ◽

Cited By ~ 21

Author(s):

Ross Hardison ◽

Kun-Mao Chao ◽

Michael Adamkiewicz ◽

Doug Price ◽

John Jackson ◽

...

Keyword(s):

Functional Analysis ◽

Globin Gene ◽

Regulatory Elements ◽

Multiple Alignment ◽

Alignment Program

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A multiple alignment program for protein sequences

Bioinformatics ◽

10.1093/bioinformatics/3.2.111 ◽

1987 ◽

Vol 3 (2) ◽

pp. 111-114 ◽

Cited By ~ 2

Author(s):

M. Santibánez ◽

K. Rohde

Keyword(s):

Protein Sequences ◽

Multiple Alignment ◽

Alignment Program

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A Heuristic Method Based on Multi-Objective Optimization Concept for Solving RNA Multiple Alignment

International Review of Automatic Control (IREACO) ◽

10.15866/ireaco.v10i5.12395 ◽

2017 ◽

Vol 10 (5) ◽

pp. 371

Author(s):

Arakil Chentoufi ◽

Abdelhakim El Fatmi ◽

Molay Ali Bekri ◽

Said Benhlima ◽

Mohamed Sabbane

Keyword(s):

Heuristic Method ◽

Multiple Alignment ◽

Multi Objective Optimization ◽

Multi Objective

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Faculty Opinions recommendation of How much backbone motion in ubiquitin is required to account for dipolar coupling data measured in multiple alignment media as assessed by independent cross-validation?

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1018180.207651 ◽

2004 ◽

Author(s):

David Cowburn

Keyword(s):

Cross Validation ◽

Dipolar Coupling ◽

Multiple Alignment

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PRALINETM: a strategy for improved multiple alignment of transmembrane proteins

Bioinformatics ◽

10.1093/bioinformatics/btm636 ◽

2008 ◽

Vol 24 (4) ◽

pp. 492-497 ◽

Cited By ~ 74

Author(s):

W. Pirovano ◽

K. A. Feenstra ◽

J. Heringa

Keyword(s):

Transmembrane Proteins ◽

Multiple Alignment

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BAliBASE: a benchmark alignment database for the evaluation of multiple alignment programs

Bioinformatics ◽

10.1093/bioinformatics/15.1.87 ◽

1999 ◽

Vol 15 (1) ◽

pp. 87-88 ◽

Cited By ~ 266

Author(s):

J. Thompson ◽

F Plewniak ◽

O Poch

Keyword(s):

Multiple Alignment

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GCALIGNER 1.0: An alignment program to compute a multiple sample comparison data matrix from large eco-chemical datasets obtained by GC

Journal of Separation Science ◽

10.1002/jssc.201300388 ◽

2013 ◽

Vol 36 (19) ◽

pp. 3206-3209 ◽

Cited By ~ 21

Author(s):

Simon Dellicour ◽

Thomas Lecocq

Keyword(s):

Data Matrix ◽

Alignment Program ◽

Multiple Sample ◽

Comparison Data

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Nestor3D: multiple alignment of protein structures based on ligand or prosthetic group position

BMC Bioinformatics ◽

10.1186/1471-2105-6-s3-s10 ◽

2005 ◽

Vol 6 (Suppl 3) ◽

pp. S10

Author(s):

Jean-Christophe Nebel

Keyword(s):

Protein Structures ◽

Multiple Alignment ◽

Prosthetic Group ◽

Group Position

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An Efficient Algorithm for Statistical Multiple Alignment on Arbitrary Phylogenetic Trees

Journal of Computational Biology ◽

10.1089/106652703322756122 ◽

2003 ◽

Vol 10 (6) ◽

pp. 869-889 ◽

Cited By ~ 33

Author(s):

G. A. Lunter ◽

I. Miklós ◽

Y. S. Song ◽

J. Hein

Keyword(s):

Efficient Algorithm ◽

Phylogenetic Trees ◽

Multiple Alignment

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