scholarly journals DNA fingerprinting and analysis of population structure in the chestnut blight fungus, Cryphonectria parasitica.

Genetics ◽  
1992 ◽  
Vol 131 (2) ◽  
pp. 297-306 ◽  
Author(s):  
M G Milgroom ◽  
S E Lipari ◽  
W A Powell
Keyword(s):  
Population Structure ◽  
Null Hypothesis ◽  
Random Mating ◽  
Population Sample ◽  
Cryphonectria Parasitica ◽  
The Other ◽  
Chestnut Blight ◽  
Dna Fingerprints ◽  
Restriction Fragments ◽  
Chestnut Blight Fungus

Abstract We analyzed DNA fingerprints in the chestnut blight fungus, Cryphonectria parasitica, for stability, inheritance, linkage and variability in a natural population. DNA fingerprints resulting from hybridization with a dispersed moderately repetitive DNA sequence of C. parasitica in plasmid pMS5.1 hybridized to 6-17 restriction fragments per individual isolate. In a laboratory cross and from progeny from a single perithecium collected from a field population, the presence/absence of 11 fragments in the laboratory cross and 12 fragments in the field progeny set segregated in 1:1 ratios. Two fragments in each progeny set cosegregated; no other linkage was detected among the segregating fragments. Mutations, identified by missing bands, were detected for only one fragment in which 4 of 43 progeny lacked a band present in both parents; no novel fragments were detected in any progeny. All other fragments appeared to be stably inherited. Hybridization patterns did not change during vegetative growth or sporulation. However, fingerprint patterns of single conidial isolates of strains EP155 and EP67 were found to be heterogenous due to mutations that occurred during culturing in the laboratory since these strains were first isolated in 1976-1977. In a population sample of 39 C. parasitica isolates, we found 33 different fingerprint patterns with pMS5.1. Most isolates differed from all other isolates by the presence or absence of several fragments. Six fingerprint patterns each occurred twice. Isolates with identical fingerprints occurred in cankers on the same chestnut stems three times; isolates within the other three pairs were isolated from cankers more than 5 m apart. The null hypothesis of random mating in this population could not be rejected if the six putative clones were removed from the analysis. Thus, a rough estimate of the clonal fraction of this population is 6 in 39 isolates (15.4%).

Population biology of the chestnut blight fungus, Cryphonectria parasitica

1995 ◽  
Vol 73 (S1) ◽  
pp. 311-319 ◽  
Author(s):  
Michael G. Milgroom
Keyword(s):  
Gene Flow ◽  
North America ◽  
Population Biology ◽  
Random Mating ◽  
Cryphonectria Parasitica ◽  
Vegetative Compatibility ◽  
Chestnut Blight ◽  
Vegetative Compatibility Groups ◽  
Chestnut Blight Fungus ◽  
Endothia Parasitica

Interest in the population biology of the chestnut blight fungus Cryphonectria parasitica has been motivated largely by the potential for biological control of chestnut blight with fungal viruses that cause hypovirulence. Earlier studies gave valuable insights into the correlation between diversity of vegetative compatibility groups and transmission of hypovirulence viruses. However, inferences about evolutionary processes affecting populations were not possible because vegetative compatibility groups are not genetically defined. Using restriction fragment length polymorphism markers, however, progress has been made in studying the origin of C. parasitica in North America, gene flow among populations, dispersal within populations, and recombination and the mating system. Cryphonectria parasitica populations in North America are genetically more similar to populations in Japan than in China, which is consistent with previous speculations that this fungus was introduced from Japan. Populations in China and Japan are quite different, suggesting little or no gene flow between these areas. Restricted gene flow and genetic drift are probably the dominant evolutionary forces shaping North American populations, with approximately 20% of gene diversity due to differences among populations (GST = 0.20). Two populations of C. parasitica in Michigan and one population in Italy are primarily clonal in structure. In contrast, sexual reproduction appears to be common in populations in eastern North America, although most of these populations deviate significantly from random mating. Deviations from random mating are most likely due to self-fertilization (uniparental inbreeding), restricted dispersal of male gametes, and mating between individuals that are more closely related genetically than would be expected by chance (biparental inbreeding). Aggregations of similar genotypes in space suggest that populations of C. parasitica may be structured into genetic neighborhoods by restricted dispersal. Future research efforts in this system will explore isolation by distance and address questions of hypovirulence virus coevolution with its fungal host. Key words: Cryphonectria parasitica, Endothia parasitica, chestnut blight, genetic neighbourhoods, inbreeding.

scholarly journals Hyperparasites Influence Population Structure of the Chestnut Blight Pathogen, Cryphonectria parasitica

2013 ◽  
Vol 103 (12) ◽  
pp. 1280-1286 ◽  
Author(s):  
Joshua C. Springer ◽  
Anita L. Davelos Baines ◽  
Dennis W. Fulbright ◽  
Matthew T. Chansler ◽  
Andrew M. Jarosz
Keyword(s):  
Population Structure ◽  
North America ◽  
Asexual Reproduction ◽  
Population Level ◽  
Cryphonectria Parasitica ◽  
Chestnut Blight ◽  
Chestnut Blight Fungus ◽  
History Of ◽  
Fungal Populations ◽  
Pathogen Populations

Vegetative compatibility (VC) is commonly used to characterize structure and diversity in fungal populations. In the chestnut blight fungus, Cryphonectria parasitica, high VC diversity is hypothesized to be responsible for the failure of hyperparasitic mycoviruses to spread through pathogen populations in North America. To test this hypothesis, we assessed VC diversity at three recovering sites in Michigan where mycoviruses had invaded and compared them with four epidemic population sites where mycoviruses were absent. VC diversity was assessed for samples collected in 1996 and 2009, which allowed us to determine how C. parasitica populations changed with time. Twelve VC types were found in 1996 while 29 were found in 2009; 75% of types overlapped between the sample dates. Sites where mycoviruses were present had unique VC structures with the exception of the recovering population site at County Line where the main VC group was also detected at two epidemic sites. With one exception, epidemic sites contained more VC groups and displayed higher population level diversity than recovering sites. Mating-type analyses of blight populations revealed that two of three recovering populations were significantly skewed for MAT2 suggesting asexual reproduction, while epidemic sites with a long history of blight infection had ratios near 50:50 suggesting sexual reproduction. We propose that selection in the largely asexual C. parasitica populations at two recovering sites favors the most-fit fungal genotype by mycovirus combination and results in reduced diversity relative to the sexually reproducing pathogen populations at epidemic sites.

Intercontinental Population Structure of the Chestnut Blight Fungus, Cryphonectria parasitica

Mycologia ◽  
1996 ◽  
Vol 88 (2) ◽  
pp. 179 ◽  
Author(s):  
Michael G. Milgroom ◽  
Kerong Wang ◽  
Yang Zhou ◽  
Susanne E. Lipari ◽  
Shigeru Kaneko
Keyword(s):  
Population Structure ◽  
Cryphonectria Parasitica ◽  
Chestnut Blight ◽  
Chestnut Blight Fungus

Intercontinental population structure of the chestnut blight fungus, Cryphonectria parasitica

Mycologia ◽  
1996 ◽  
Vol 88 (2) ◽  
pp. 179-190 ◽  
Author(s):  
Michael G. Milgroom ◽  
Kerong Wang ◽  
Yang Zhou ◽  
Susanne E. Lipari ◽  
Shigeru Kaneko
Keyword(s):  
Population Structure ◽  
Cryphonectria Parasitica ◽  
Chestnut Blight ◽  
Chestnut Blight Fungus

Crypt1, an active Ac-like transposon from the chestnut blight fungus, Cryphonectria parasitica

2001 ◽  
Vol 265 (4) ◽  
pp. 730-738 ◽  
Author(s):  
D. Linder-Basso ◽  
R. Foglia ◽  
P. Zhu ◽  
B.I. Hillman
Keyword(s):  
Cryphonectria Parasitica ◽  
Chestnut Blight ◽  
Chestnut Blight Fungus

scholarly journals Hard Mast Production Before and After the Chestnut Blight

2000 ◽  
Vol 24 (4) ◽  
pp. 196-201 ◽  
Author(s):  
Seth J. Diamond ◽  
Robert H. Giles ◽  
Roy L. Kirkpatrick ◽  
Gary J. Griffin
Keyword(s):  
Carrying Capacity ◽  
Basal Area ◽  
Cryphonectria Parasitica ◽  
Castanea Dentata ◽  
Chestnut Blight ◽  
Wildlife Species ◽  
Chestnut Blight Fungus ◽  
Southern Appalachian ◽  
Before And After ◽  
Mast Production

Abstract We estimated hard mast production of a Southern Appalachian forest for two 10 yr intervals: one before and one, 35 yr after, the chestnut blight fungus (Cryphonectria parasitica) (Murr.) Barr, had killed all mature chestnut trees. The basal area of hard mast-producing trees in the postblight forest was 28% less than in the preblight forest. The estimate of hard mast output was 34% less after the chestnut blight. Postblight production was less than preblight production for 8 of 10 yr. During 5 of these years, postblight production was only 5-27% of preblight production. Annual preblight mast production was relatively stable, whereas annual postblight production fluctuated substantially. Our findings suggest that the loss of mature chestnuts (Castanea dentata) markedly reduced the Southern Appalachian forest's carrying capacity for certain wildlife species. South. J. Appl. For 24(4):196-201.

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