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Modeling DNA unzipping in the presence of bound proteins
Physical Review E
◽
10.1103/physreve.72.031906
◽
2005
◽
Vol 72
(3)
◽
Cited By ~ 3
Author(s):
Farhat Habib
◽
Ralf Bundschuh
Keyword(s):
Dna Unzipping
Download Full-text
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References
Force and kinetic barriers to initiation of DNA unzipping
Physical Review E
◽
10.1103/physreve.65.041907
◽
2002
◽
Vol 65
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◽
Cited By ~ 45
Author(s):
Simona Cocco
◽
Rémi Monasson
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John F. Marko
Keyword(s):
Dna Unzipping
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Kinetic Barriers
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DNA Unzipping and Protein Unfolding Using Nanopores
Methods in Molecular Biology - Nanopore-Based Technology
◽
10.1007/978-1-61779-773-6_4
◽
2012
◽
pp. 55-75
◽
Cited By ~ 2
Author(s):
Céline Merstorf
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◽
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◽
Laurent Bacri
◽
...
Keyword(s):
Protein Unfolding
◽
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Diffusive dynamics of DNA unzipping in a nanopore
Journal of Computational Chemistry
◽
10.1002/jcc.24236
◽
2015
◽
Vol 37
(5)
◽
pp. 467-476
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Cited By ~ 2
Author(s):
Anna Stachiewicz
◽
Andrzej Molski
Keyword(s):
Dna Unzipping
◽
Diffusive Dynamics
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Extended Abstract: Plateaus and Jumps in Single-Molecule DNA Unzipping Experiments
Journal of Biological Physics
◽
10.1007/s10867-005-6062-8
◽
2005
◽
Vol 31
(3-4)
◽
pp. 241-242
Author(s):
David R. Nelson
Keyword(s):
Single Molecule
◽
Dna Unzipping
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Complete Phase Diagram of DNA Unzipping: Eye,YFork, and Triple Point
Physical Review Letters
◽
10.1103/physrevlett.93.248102
◽
2004
◽
Vol 93
(24)
◽
Cited By ~ 41
Author(s):
Rajeev Kapri
◽
Somendra M. Bhattacharjee
◽
Flavio Seno
Keyword(s):
Phase Diagram
◽
Triple Point
◽
Dna Unzipping
◽
Complete Phase Diagram
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Measurement of the Phase Diagram of DNA Unzipping in the Temperature-Force Plane
Physical Review Letters
◽
10.1103/physrevlett.93.078101
◽
2004
◽
Vol 93
(7)
◽
Cited By ~ 77
Author(s):
C. Danilowicz
◽
Y. Kafri
◽
R. S. Conroy
◽
V. W. Coljee
◽
J. Weeks
◽
...
Keyword(s):
Phase Diagram
◽
Dna Unzipping
◽
Temperature Force
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Statistical Properties of Metastable Intermediates in DNA Unzipping
Physical Review Letters
◽
10.1103/physrevlett.103.248106
◽
2009
◽
Vol 103
(24)
◽
Cited By ~ 16
Author(s):
J. M. Huguet
◽
N. Forns
◽
F. Ritort
Keyword(s):
Statistical Properties
◽
Dna Unzipping
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Free-Energy Landscape and Characteristic Forces for the Initiation of DNA Unzipping
Biophysical Journal
◽
10.1016/j.bpj.2015.01.025
◽
2015
◽
Vol 108
(7)
◽
pp. 1727-1738
◽
Cited By ~ 6
Author(s):
Ahmet Mentes
◽
Ana Maria Florescu
◽
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◽
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◽
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◽
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Keyword(s):
Free Energy
◽
Energy Landscape
◽
Free Energy Landscape
◽
Dna Unzipping
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Effects of the eye phase in DNA unzipping
Physical Review E
◽
10.1103/physreve.73.050903
◽
2006
◽
Vol 73
(5)
◽
Cited By ~ 28
Author(s):
Debaprasad Giri
◽
Sanjay Kumar
Keyword(s):
Dna Unzipping
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Hysteresis loop area scaling exponents in DNA unzipping by a periodic force: A Langevin dynamics simulation study
Physical Review E
◽
10.1103/physreve.104.024401
◽
2021
◽
Vol 104
(2)
◽
Author(s):
Rajeev Kapri
Keyword(s):
Hysteresis Loop
◽
Simulation Study
◽
Langevin Dynamics
◽
Dynamics Simulation
◽
Scaling Exponents
◽
Periodic Force
◽
Dna Unzipping
◽
Loop Area
◽
Hysteresis Loop Area
◽
Langevin Dynamics Simulation
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