Protein function prediction using frequent patterns in protein-protein interaction networks

2011 Eighth International Conference on Fuzzy Systems and Knowledge Discovery (FSKD) ◽

10.1109/fskd.2011.6019850 ◽

2011 ◽

Author(s):

Peipei Li ◽

Lyong Heo ◽

Meijing Li ◽

Keun Ho Ryu ◽

Gouchol Pok

Keyword(s):

Protein Interaction ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Frequent Patterns ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Protein Function Prediction Using Protein–Protein Interaction Networks

Protein Function Prediction for Omics Era ◽

10.1007/978-94-007-0881-5_13 ◽

2011 ◽

pp. 243-270

Author(s):

Hon Nian Chua ◽

Guimei Liu ◽

Limsoon Wong

Keyword(s):

Protein Interaction ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Global protein function prediction from protein-protein interaction networks

Nature Biotechnology ◽

10.1038/nbt825 ◽

2003 ◽

Vol 21 (6) ◽

pp. 697-700 ◽

Author(s):

Alexei Vazquez ◽

Alessandro Flammini ◽

Amos Maritan ◽

Alessandro Vespignani

Keyword(s):

Protein Interaction ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Global Voting Model for Protein Function Prediction from Protein-Protein Interaction Networks

Intelligent Computing in Bioinformatics - Lecture Notes in Computer Science ◽

10.1007/978-3-319-09330-7_54 ◽

2014 ◽

pp. 466-477

Author(s):

Yi Fang ◽

Mengtian Sun ◽

Guoxian Dai ◽

Karthik Ramani

Keyword(s):

Protein Interaction ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks ◽

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Active learning for protein function prediction in protein–protein interaction networks

Neurocomputing ◽

10.1016/j.neucom.2014.05.075 ◽

2014 ◽

Vol 145 ◽

pp. 44-52 ◽

Author(s):

Wei Xiong ◽

Luyu Xie ◽

Shuigeng Zhou ◽

Jihong Guan

Keyword(s):

Active Learning ◽

Protein Interaction ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Protein function prediction by collective classification with explicit and implicit edges in protein-protein interaction networks

BMC Bioinformatics ◽

10.1186/1471-2105-14-s12-s4 ◽

2013 ◽

Vol 14 (S12) ◽

Author(s):

Wei Xiong ◽

Hui Liu ◽

Jihong Guan ◽

Shuigeng Zhou

Keyword(s):

Protein Interaction ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Collective Classification ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Active Learning for Protein Function Prediction in Protein-Protein Interaction Networks

Pattern Recognition in Bioinformatics - Lecture Notes in Computer Science ◽

10.1007/978-3-642-39159-0_16 ◽

2013 ◽

pp. 172-183

Author(s):

Wei Xiong ◽

Luyu Xie ◽

Jihong Guan ◽

Shuigeng Zhou

Keyword(s):

Active Learning ◽

Protein Interaction ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Prediction of Protein Function Using Common-Neighbors in Protein-Protein Interaction Networks

Sixth IEEE Symposium on BioInformatics and BioEngineering (BIBE'06) ◽

10.1109/bibe.2006.253342 ◽

2006 ◽

Author(s):

Chuan Lin ◽

Daxin Jiang ◽

Aidong Zhang

Keyword(s):

Protein Interaction ◽

Protein Function ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Identification of core-attachment complexes based on maximal frequent patterns in protein-protein interaction networks

10.1002/pmic.201100194 ◽

2011 ◽

Vol 11 (19) ◽

pp. 3826-3834 ◽

Author(s):

Liang Yu ◽

Lin Gao ◽

ChuiLiang Kong

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Frequent Patterns ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Correction: Going the Distance for Protein Function Prediction: A New Distance Metric for Protein Interaction Networks

PLoS ONE ◽

10.1371/annotation/343bf260-f6ff-48a2-93b2-3cc79af518a9 ◽

2013 ◽

Vol 8 (10) ◽

Author(s):

Mengfei Cao ◽

Hao Zhang ◽

Jisoo Park ◽

Noah M. Daniels ◽

Mark E. Crovella ◽

...

Keyword(s):

Protein Interaction ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Distance Metric

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Going the Distance for Protein Function Prediction: A New Distance Metric for Protein Interaction Networks

PLoS ONE ◽

10.1371/journal.pone.0076339 ◽

2013 ◽

Vol 8 (10) ◽

pp. e76339 ◽

Author(s):

Mengfei Cao ◽

Hao Zhang ◽

Jisoo Park ◽

Noah M. Daniels ◽

Mark E. Crovella ◽

...

Keyword(s):

Protein Interaction ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Distance Metric

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