scholarly journals Heterogeneous Idealization of Ion Channel Recordings – Open Channel Noise

2021 ◽  
Vol 20 (1) ◽  
pp. 57-78
Author(s):  
Florian Pein ◽  
Annika Bartsch ◽  
Claudia Steinem ◽  
Axel Munk
2015 ◽  
Vol 4 (4) ◽  
pp. 364
Author(s):  
Ahmed Mahmood Khudhur ◽  
Ahmed N Abdalla ◽  
Jasni Mohamad Zain ◽  
Hai Tao

<p class="MsoNormal" style="text-align: justify; text-justify: inter-ideograph;"><span style="font-size: 10.0pt;">In recent years, it has been argued and experimentally shown that ion channel noise in neurons can have profound effects on the neuron’s dynamical behavior. Most profoundly, ion channel noise was seen to be able to cause spontaneous firing and stochastic resonance. It has been recently found that a non-trivially persistent cross correlation takes place between the transmembrane voltage fluctuations and the component of open channel fluctuations attributed to gate multiplicity. This non-trivial phenomenon was found to play a major augmentative role for the elevation of excitability and spontaneous firing in the small size cell. In addition, the same phenomenon was found to significantly enhance the spike coherence. In this paper, statistics of the coefficient of variation, to be obtained from the colored stochastic Hodgkin-Huxley equations using voltage clamps techniqueswill be studied. The simulation result shows the coefficient of variation; enhance the agreement with the microscopeinthe case of the noisy currents.</span></p>


2014 ◽  
Vol 306 (5) ◽  
pp. C506-C513 ◽  
Author(s):  
Lisa Ebihara ◽  
Yegor Korzyukov ◽  
Sorabh Kothari ◽  
Jun-Jie Tong

The lens is proposed to have an internal microcirculation system consisting of continuously circulating ionic fluxes that play an essential role in maintaining lens transparency. One of the key components of this system is the sodium leak conductance. Here we investigate the contribution of Cx46 hemichannels to the basal membrane permeability of peripheral fiber cells isolated from transgenic mouse lenses lacking Cx50 or both Cx50 and Cx46 (dKO) using the whole cell patch-clamp technique. Our results show that Cx46 hemichannels were largely closed at a resting voltage of −60 mV in the presence of millimolar divalent cation concentrations. However, even though the vast majority of these channels were closed at −60 mV, a small, persistent, inward current could still be detected. This current could be mostly blocked by exposure to 1 mM La3+ and was not observed in fiber cells isolated from dKO mouse lenses suggesting that it was due to Cx46 hemichannels. In addition, Cx50−/− fiber cells showed increased open channel noise and a depolarized resting potential compared with dKO fiber cells. Exposure of Cx50−/− fiber cells to La3+ hyperpolarized the resting potential to −58 mV, which is similar to the value of resting potential measured in dKO fiber and significantly reduced the open channel noise. In conclusion, these results suggest that Cx46 hemichannels may contribute to the sodium leak conductance in lens fiber cells.


1994 ◽  
Vol 104 (5) ◽  
pp. 857-883 ◽  
Author(s):  
A H Hainsworth ◽  
R A Levis ◽  
R S Eisenberg

Open-channel noise was studied in the large potassium channel of the sarcoplasmic reticulum (SR). Inside-out patches were excised directly from the SR of split skeletal muscle fibers of lobster, with lobster relaxing ringer (LRR) in bath and pipette. The power spectrum of open-channel noise is very low and approximately flat in the 100 Hz-10 kHz frequency range. At 20 degrees C, with an applied voltage of 50 mV, the mean single-channel current (i) is 9 pA (mean single-channel conductance = 180 pS) and the mean power spectral density 1.1 x 10(-29) A2/Hz. The latter increases nonlinearly with (i), showing a progressively steeper dependence as (i) increases. At 20 mV, the mean power spectral density is almost independent of (i) and approximately 1.4 times that of the Johnson noise calculated for the equivalent ideal resistor with zero net current; at 70 mV it increases approximately in proportion to (i)2. The mean power spectral density has a weak temperature dependence, very similar to that of (i), and both are well described by a Q10 of 1.3 throughout the range 3-40 degrees C. Discrete ion transport events are thought to account for a significant fraction of the measured open-channel noise, probably approximately 30-50% at 50 mV. Brief interruptions of the single-channel current, due either to blockage of the open channel by an extrinsic aqueous species, or to intrinsic conformational changes in the channel molecule itself, were a possible additional source of open-channel noise. Experiments in modified bathing solutions indicate, however, that open-channel noise is not affected by any of the identified aqueous species present in LRR. In particular, magnesium ions, the species thought most likely to cause brief blockages, and calcium and hydrogen ions, have no detectable effect. This channel's openings exhibit many brief closings and substrates, due to intrinsic gating of the channel. Unresolved brief full closings are calculated to make a negligible contribution (&lt; 1%) to the measured power spectral density. The only significant source of noise due to band width-limited missed events is brief, frequent 80% substrates (mean duration 20 microseconds, mean frequency 1,000 s-1) which account for a small part of the measured power spectral density (approximately 14%, at 50 mV, 20 degrees C). We conclude that a large fraction of the measured open-channel noise results from intrinsic conductance fluctuations, with a corner frequency higher than the resolution of our recordings, in the range 10(4)-10(7) Hz.(ABSTRACT TRUNCATED AT 400 WORDS)


Perception ◽  
1997 ◽  
Vol 26 (1_suppl) ◽  
pp. 38-38
Author(s):  
M Weckström

In dim light, photoreceptor cells and subsequent neural elements typically show high absolute sensitivity, implying that both phototransduction and synaptic transmission work at a high gain and even a single photon may produce a large electrical response. However, when there is more light, rapid adaptation at several levels of signal processing ensures that the information channel is not congested, but optimally filled with relevant voltage responses. All this is achieved by carefully tuned mechanisms that include several types of ion channels in the cell membrane. These ion-channel mechanisms have been thoroughly investigated in a few species of invertebrates and vertebrates, and some general principles are being revealed. The membrane capacitance and the resistance of the cell together define the time constant of the membrane, thus the maximum speed for building up a voltage response to light. Both in vertebrate cones and in insect microvillar photoreceptors, phototransduction takes place in an enlarged part of the cell membrane, which implies a large capacitance. This can be counteracted by making the membrane more leaky by opening more ion channels. In insect photoreceptors several types of potassium channels have been identified that perform exactly this kind of function. The types of channels vary according to the required speed of phototransduction, ie depending on the life style of the animal. In diurnal dipteran insects the potassium channels are typically of the slowly inactivating type. This channel type regulates the cell impedance according to the depolarisation caused by light stimulation. In insects active in dim environments, the potassium channels found have been predominantly rapidly inactivating. The function of this type of channels is currently under debate. In vertebrate photoreceptors several potassium channel types, including channels sensitive to intracellular calcium and pH, are expressed in the inner segments and modulate photoresponses. Opening and closing of the potassium channels also generates neural noise and thus degrades the signal-to-noise ratio (SNR). However, if the gain of phototransduction is high enough, the dominant noise comes from photon fluctuations, or from the biochemical transduction machinery, or—in some situations—from spontaneous photon-like events. Channel noise is then insignificant by comparison. Thus the optimisation of the SNR is a trade-off between bandwidth (ie speed) and amplification of the signal, and here the voltage-gated potassium channels are of prime importance.


2005 ◽  
Vol 15 (12) ◽  
pp. 1143-1149 ◽  
Author(s):  
A. Aldo Faisal ◽  
John A. White ◽  
Simon B. Laughlin

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