scholarly journals Complete Genome Sequence of Actinobacillus succinogenes GXAS137, a Highly Efficient Producer of Succinic Acid

2018 ◽  
Vol 6 (8) ◽  
Author(s):  
Hongyan Zhang ◽  
Naikun Shen ◽  
Yan Qin ◽  
Jing Zhu ◽  
Yi Li ◽  
...  
Keyword(s):  
Succinic Acid ◽  
Genome Assembly ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Actinobacillus Succinogenes ◽  
Guangxi Province ◽  
Circular Chromosome ◽  
Coding Sequences ◽  
Dna Coding ◽  
Efficient Producer

ABSTRACT The bacterium Actinobacillus succinogenes GXAS137, an efficient producer of succinic acid, was isolated from bovine rumen in Nanning, Guangxi Province, China. Here, we present the 2.3-Mb genome assembly of this strain, which consists of 2,314,479 bp (G+C content of 44.89%) with a circular chromosome, 2,235 DNA coding sequences, 57 tRNAs, and 15 rRNAs.

scholarly journals Complete Genome Sequence of Lanthionine-Producing Lactobacillus brevis Strain 100D8, Generated by PacBio Sequencing

2018 ◽  
Vol 7 (14) ◽  
Author(s):  
Min-Jung Kim ◽  
Hye Sun Kim ◽  
Sam Churl Kim ◽  
Youn-Sig Kwak
Keyword(s):  
Antifungal Activity ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Lactobacillus Brevis ◽  
Pacbio Sequencing ◽  
Circular Chromosome ◽  
Coding Sequences ◽  
Content Type

Lactobacillus brevis strain 100D8 was isolated from rye silage and showed rapid acidification ability in vitro and antifungal activity against mycotoxin-producing fungi. We report here the complete genome sequence of L. brevis strain 100D8, which has a circular chromosome (2,351,988 bp, 2,304 coding sequences [CDSs]) and three plasmids (45,061 bp, 57 CDSs; 40,740 bp, 40 CDSs; and 39,943 bp, 57 CDSs).

scholarly journals Complete Genome Sequence of Bacillus velezensis Strain DKU_NT_04, Isolated from a Traditional Korean Food Made from Soybeans (Cheonggukjang)

2020 ◽  
Vol 9 (24) ◽  
Author(s):  
Man-Seok Bang ◽  
Hee-Won Jeong ◽  
Yea-Jin Lee ◽  
Sang-Cheol Lee ◽  
Gi Soo Lee ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bacillus Velezensis ◽  
Coding Sequences ◽  
Content Type ◽  
Fermented Soybean ◽  
Soybean Paste ◽  
Korean Food

ABSTRACT In the present work, we report the complete genome sequence of Bacillus velezensis DKU_NT_04, isolated from cheonggukjang, which is a traditional Korean fermented soybean paste. The final genome assembly consists of a 4.328-Mbp chromosome with 4,134 coding sequences and a G+C content of 45.21%.

scholarly journals Complete Genome Sequence of Streptococcus salivarius HSISS4, a Human Commensal Bacterium Highly Prevalent in the Digestive Tract

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
Johann Mignolet ◽  
Laetitia Fontaine ◽  
Michiel Kleerebezem ◽  
Pascal Hols
Keyword(s):  
Small Intestine ◽  
Microbial Communities ◽  
Digestive Tract ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Streptococcus Salivarius ◽  
Commensal Bacterium ◽  
Circular Chromosome ◽  
Coding Sequences

The human commensal bacterium Streptococcus salivarius plays a major role in the equilibrium of microbial communities of the digestive tract. Here, we report the first complete genome sequence of a Streptococcus salivarius strain isolated from the small intestine, namely, HSISS4. Its circular chromosome comprises 1,903 coding sequences and 2,100,988 nucleotides.

scholarly journals Complete Genome Sequence of Pseudomonas syringae pv. lapsa Strain ATCC 10859, Isolated from Infected Wheat

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Jun Kong ◽  
Hongshan Jiang ◽  
Baiyun Li ◽  
Wenjun Zhao ◽  
Zhihong Li ◽  
...  
Keyword(s):  
Pseudomonas Syringae ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Gene Clusters ◽  
Strain Atcc ◽  
Circular Chromosome ◽  
Coding Sequences

Pseudomonas syringae pv. lapsa is a pathovar of Pseudomonas syringae that can infect wheat. The complete genome of P. syringae pv. lapsa strain ATCC 10859 contains a 5,918,899-bp circular chromosome with 4,973 coding sequences, 16 rRNAs, 69 tRNAs, and an average GC content of 59.13%. The analysis of this genome revealed several gene clusters that are related to pathogenesis and virulence.

scholarly journals Complete Genome Sequence of Buffalopox Virus

2018 ◽  
Vol 6 (21) ◽  
Author(s):  
Babak Afrough ◽  
Afia Zafar ◽  
Rumina Hasan ◽  
Roger Hewson
Keyword(s):  
Phylogenetic Analysis ◽  
Genome Sequence ◽  
Genome Assembly ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virus Isolate ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type

ABSTRACT The first complete genome assembly of buffalopox virus isolate Karachi 2005, with a length of 195,630 bp, is presented here. Phylogenetic analysis shows the virus to cluster within Vaccinia species, and the genome contains 177 protein-coding sequences.

scholarly journals Complete Genome Sequence of Megamonas funiformis JCM 14723T

2020 ◽  
Vol 9 (16) ◽  
Author(s):  
Dieter M. Tourlousse ◽  
Mitsuo Sakamoto ◽  
Takamasa Miura ◽  
Koji Narita ◽  
Akiko Ohashi ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Trna Genes ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type

We announce the complete genome sequence of Megamonas funiformis JCM 14723T (YIT 11815T). The genome consists of a circular chromosome (2,522,577 bp, 31.5% G+C content) and a plasmid of 46,189 bp (29.4% G+C content). The genome was predicted to contain 6 rRNA operons, 53 tRNA genes, and 2,440 protein-coding sequences.

scholarly journals Complete Genome Sequence of Blautia producta JCM 1471T

2020 ◽  
Vol 9 (17) ◽  
Author(s):  
Dieter M. Tourlousse ◽  
Mitsuo Sakamoto ◽  
Takamasa Miura ◽  
Koji Narita ◽  
Akiko Ohashi ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Rrna Genes ◽  
Trna Genes ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Single Circular Chromosome

We report a complete genome sequence of Blautia producta JCM 1471T. The genome consists of a single circular chromosome of 6,197,116 bp with a G+C content of 45.7%. The genome was annotated as containing 5 complete sets of rRNA genes, 70 tRNA genes, and 5,516 protein-coding sequences.

scholarly journals Complete Genome Sequence of Kocuria palustris MU14/1

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Michael J. Calcutt ◽  
Mark F. Foecking
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Ecological Distribution ◽  
Circular Chromosome ◽  
Coding Sequences ◽  
Gene Set ◽  
Single Circular Chromosome

Presented here is the first completely assembled genome sequence of Kocuria palustris , an actinobacterial species with broad ecological distribution. The single, circular chromosome of K. palustris MU14/1 comprises 2,854,447 bp, has a G+C content of 70.5%, and contains a deduced gene set of 2,521 coding sequences.

scholarly journals Complete Genome Sequence of Mycobacterium avium subsp. hominissuis Strain JP-H-1, Isolated from an Equine Abortion Case in Japan

2019 ◽  
Vol 8 (48) ◽  
Author(s):  
Yuta Kinoshita ◽  
Hidekazu Niwa ◽  
Eri Uchida-Fujii ◽  
Toshio Nukada
Keyword(s):  
Genome Sequence ◽  
Mycobacterium Avium ◽  
Genome Assembly ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Mycobacterium Avium Subsp ◽  
Circular Chromosome ◽  
Content Type ◽  
Equine Abortion ◽  
Abortion Case

Here, we describe the complete genome assembly of Mycobacterium avium subsp. hominissuis strain JP-H-1, collected from an equine abortion case in Japan. JP-H-1 has a 5,491,452-bp circular chromosome and 3 plasmids.

scholarly journals Complete Genome Sequence of Weissella cibaria Strain BM2, Isolated from Korean Kimchi

2020 ◽  
Vol 9 (34) ◽  
Author(s):  
Jang-In Shin ◽  
Sang Gi Oh ◽  
Man-Seok Bang ◽  
Hee-Won Jeong ◽  
Yea-Jin Lee ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Broad Spectrum ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Health Benefits ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Weissella Cibaria

ABSTRACT Weissella cibaria appears to have broad-spectrum health benefits. Here, we report the genome sequence of Weissella cibaria strain BM2, which was isolated from homemade kimchi; it consists of one circular chromosome of 2,462,443 bp and one plasmid of 11,067 bp. A total of 2,337 coding sequences were predicted, including 2,117 protein-coding sequences and a G+C content of 45.06%.

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