scholarly journals Complete Genome Sequence of Lanthionine-Producing Lactobacillus brevis Strain 100D8, Generated by PacBio Sequencing

2018 ◽  
Vol 7 (14) ◽  
Author(s):  
Min-Jung Kim ◽  
Hye Sun Kim ◽  
Sam Churl Kim ◽  
Youn-Sig Kwak
Keyword(s):  
Antifungal Activity ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Lactobacillus Brevis ◽  
Pacbio Sequencing ◽  
Circular Chromosome ◽  
Coding Sequences ◽  
Content Type

Lactobacillus brevis strain 100D8 was isolated from rye silage and showed rapid acidification ability in vitro and antifungal activity against mycotoxin-producing fungi. We report here the complete genome sequence of L. brevis strain 100D8, which has a circular chromosome (2,351,988 bp, 2,304 coding sequences [CDSs]) and three plasmids (45,061 bp, 57 CDSs; 40,740 bp, 40 CDSs; and 39,943 bp, 57 CDSs).

scholarly journals Complete Genome Sequence of Megamonas funiformis JCM 14723T

2020 ◽  
Vol 9 (16) ◽  
Author(s):  
Dieter M. Tourlousse ◽  
Mitsuo Sakamoto ◽  
Takamasa Miura ◽  
Koji Narita ◽  
Akiko Ohashi ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Trna Genes ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type

We announce the complete genome sequence of Megamonas funiformis JCM 14723T (YIT 11815T). The genome consists of a circular chromosome (2,522,577 bp, 31.5% G+C content) and a plasmid of 46,189 bp (29.4% G+C content). The genome was predicted to contain 6 rRNA operons, 53 tRNA genes, and 2,440 protein-coding sequences.

scholarly journals Complete Genome Sequence of Blautia producta JCM 1471T

2020 ◽  
Vol 9 (17) ◽  
Author(s):  
Dieter M. Tourlousse ◽  
Mitsuo Sakamoto ◽  
Takamasa Miura ◽  
Koji Narita ◽  
Akiko Ohashi ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Rrna Genes ◽  
Trna Genes ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Single Circular Chromosome

We report a complete genome sequence of Blautia producta JCM 1471T. The genome consists of a single circular chromosome of 6,197,116 bp with a G+C content of 45.7%. The genome was annotated as containing 5 complete sets of rRNA genes, 70 tRNA genes, and 5,516 protein-coding sequences.

scholarly journals Complete Genome Sequence of Weissella cibaria Strain BM2, Isolated from Korean Kimchi

2020 ◽  
Vol 9 (34) ◽  
Author(s):  
Jang-In Shin ◽  
Sang Gi Oh ◽  
Man-Seok Bang ◽  
Hee-Won Jeong ◽  
Yea-Jin Lee ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Broad Spectrum ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Health Benefits ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Weissella Cibaria

ABSTRACT Weissella cibaria appears to have broad-spectrum health benefits. Here, we report the genome sequence of Weissella cibaria strain BM2, which was isolated from homemade kimchi; it consists of one circular chromosome of 2,462,443 bp and one plasmid of 11,067 bp. A total of 2,337 coding sequences were predicted, including 2,117 protein-coding sequences and a G+C content of 45.06%.

scholarly journals Complete Genome Sequence of the Diatom-Associated Bacterium Sphingorhabdus sp. Strain SMR4y

2019 ◽  
Vol 8 (29) ◽  
Author(s):  
Mats Töpel ◽  
Matthew I. M. Pinder ◽  
Oskar N. Johansson ◽  
Olga Kourtchenko ◽  
Anna Godhe ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Bacterial Strain ◽  
Complete Genome ◽  
Marine Diatom ◽  
Circular Chromosome ◽  
Coding Sequences ◽  
Content Type ◽  
Skeletonema Marinoi

The bacterial strain SMR4y belongs to the diverse microbiome of the marine diatom Skeletonema marinoi strain R05AC. After assembly of its genome, presented here, and subsequent analyses, we placed it in the genus Sphingorhabdus. This strain has a 3,479,724-bp circular chromosome (with 3,340 coding sequences) and no known plasmids.

scholarly journals Complete Genome Sequence of Flavonifractor plautii JCM 32125T

2020 ◽  
Vol 9 (17) ◽  
Author(s):  
Dieter M. Tourlousse ◽  
Mitsuo Sakamoto ◽  
Takamasa Miura ◽  
Koji Narita ◽  
Akiko Ohashi ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Rrna Genes ◽  
Trna Genes ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Single Circular Chromosome

We report the complete genome sequence of Flavonifractor plautii JCM 32125T (=VPI 0310T). The genome consists of a single circular chromosome of 3,985,392 bp (G+C content, 60.9%) and was predicted to contain 3 complete sets of rRNA genes, 63 tRNA genes, and 3,764 protein-coding sequences.

scholarly journals Complete Genome Sequence of Lactococcus lactis subsp. lactis Strain 14B4, Which Inhibits the Growth of Salmonella enterica Serotype Poona In Vitro

2018 ◽  
Vol 7 (19) ◽  
Author(s):  
Thao D. Tran ◽  
Steven Huynh ◽  
Craig T. Parker ◽  
Ruyang Han ◽  
Robert Hnasko ◽  
...  
Keyword(s):  
Lactococcus Lactis ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Salmonella Enterica ◽  
Complete Genome ◽  
Northern California ◽  
Content Type ◽  
Lactococcus Lactis Subsp ◽  
Lactis Strain

We present here the complete genome sequence of Lactococcus lactis strain 14B4, isolated from almond drupes in northern California. This strain was observed to inhibit the growth of Salmonella enterica serotype Poona strain RM3363 in vitro.

scholarly journals Complete Genome Sequence of Streptococcus pneumoniae Strain Rx1, a Hex Mismatch Repair-Deficient Standard Transformation Recipient

2021 ◽  
Vol 10 (41) ◽  
Author(s):  
Anna Maria Cuppone ◽  
Lorenzo Colombini ◽  
Valeria Fox ◽  
David Pinzauti ◽  
Francesco Santoro ◽  
...  
Keyword(s):  
Streptococcus Pneumoniae ◽  
Mismatch Repair ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Open Reading Frames ◽  
Circular Chromosome ◽  
Content Type ◽  
Sequencing Technologies

The complete genome sequence of Streptococcus pneumoniae strain Rx1, a Hex mismatch repair-deficient standard transformation recipient, was obtained by combining Nanopore and Illumina sequencing technologies. The genome consists of a 2.03-Mb circular chromosome, with 2,054 open reading frames and a GC content of 39.72%.

scholarly journals Complete Genome Sequence of Bacillus velezensis Strain DKU_NT_04, Isolated from a Traditional Korean Food Made from Soybeans (Cheonggukjang)

2020 ◽  
Vol 9 (24) ◽  
Author(s):  
Man-Seok Bang ◽  
Hee-Won Jeong ◽  
Yea-Jin Lee ◽  
Sang-Cheol Lee ◽  
Gi Soo Lee ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bacillus Velezensis ◽  
Coding Sequences ◽  
Content Type ◽  
Fermented Soybean ◽  
Soybean Paste ◽  
Korean Food

ABSTRACT In the present work, we report the complete genome sequence of Bacillus velezensis DKU_NT_04, isolated from cheonggukjang, which is a traditional Korean fermented soybean paste. The final genome assembly consists of a 4.328-Mbp chromosome with 4,134 coding sequences and a G+C content of 45.21%.

scholarly journals Complete High-Quality Genome Sequence of Clostridium limosum (Hathewaya limosa) Isolate 14S0207, Recovered from a Cow with Suspected Blackleg in Germany

2020 ◽  
Vol 9 (2) ◽  
Author(s):  
Prasad Thomas ◽  
Mostafa Y. Abdel-Glil ◽  
Anne Busch ◽  
Lothar H. Wieler ◽  
Inga Eichhorn ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Intestinal Tract ◽  
High Quality ◽  
Circular Chromosome ◽  
Content Type ◽  
High Quality Genome

Clostridium limosum can be found in soil and the intestinal tract of animals. In 2014, C. limosum was isolated from a suspected blackleg outbreak in cattle in Schleswig-Holstein, Germany. We present a complete genome sequence of a C. limosum strain represented by a circular chromosome and three plasmids.

scholarly journals Complete Genome Sequence of the Marine Hydrocarbon Degrader Alcaligenes aquatilis QD168, Isolated from Crude Oil-Polluted Sediment of Quintero Bay, Central Chile

2019 ◽  
Vol 8 (5) ◽  
Author(s):  
Roberto E. Durán ◽  
Bárbara Barra-Sanhueza ◽  
Francisco Salvà-Serra ◽  
Valentina Méndez ◽  
Daniel Jaén-Luchoro ◽  
...  
Keyword(s):  
Crude Oil ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Central Chile ◽  
Coding Sequences ◽  
Content Type ◽  
Polluted Sediment ◽  
Degrading Bacterium ◽  
Hydrocarbon Degrader

Alcaligenes aquatilis strain QD168 (= CCUG 69566) is a marine hydrocarbon-degrading bacterium isolated from crude oil-polluted sediment from Quintero Bay, Central Chile. Here, we present the 4.32-Mb complete genome sequence of strain QD168, with 3,892 coding sequences, 58 tRNAs, and a 56.3% G+C content.

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