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Published By American Society For Microbiology

2169-8287

2018 ◽  
Vol 6 (27) ◽  
Author(s):  
Hue Thi Kim Vu ◽  
Matthew J. Stasiewicz ◽  
Soottawat Benjakul ◽  
Kitiya Vongkamjan

We report here the complete genome sequences of three Listeria phages (PSU-VKH-LP019, PSU-VKH-LP040, and PSU-VKH-LP041), which were newly induced from lysogenic isolates of Listeria monocytogenes from seafood and a seafood processing environment in Thailand. The three phages show circularly permuted double-stranded DNA genomes with sizes of 38.6, 39.6, and 48.3 kb.


2018 ◽  
Vol 6 (27) ◽  
Author(s):  
Chenyu Zhang ◽  
Hu Shan ◽  
Jianxin Wen

Porcine reproductive and respiratory syndrome virus (PRRSV), which leads to tremendous economic losses worldwide, is currently one of the most threatening viruses for the swine industry. However, PRRSV outbreaks in West China are rarely reported, even though the virus has remained active for a long time across the country.


2018 ◽  
Vol 6 (27) ◽  
Author(s):  
Nicolas E. Gaultier ◽  
Ana Carolina M. Junqueira ◽  
Akira Uchida ◽  
Rikky W. Purbojati ◽  
James N. I. Houghton ◽  
...  

Serratia marcescens strain SGAir0764 was isolated from a tropical air sample collected in Singapore. The complete genome, sequenced on the PacBio RS II platform, consists of one chromosome with 5.1 Mb and one plasmid with 76.4 kb.


2018 ◽  
Vol 6 (27) ◽  
Author(s):  
Nicolas E. Gaultier ◽  
Ana Carolina M. Junqueira ◽  
Akira Uchida ◽  
Rikky W. Purbojati ◽  
James N. I. Houghton ◽  
...  

The thermophilic bacterium Geobacillus thermoleovorans was isolated from a tropical air sample collected in Singapore. The genome was sequenced on the PacBio RS II platform and consists of one chromosome with 3.6 Mb and one plasmid with 75 kb.


2018 ◽  
Vol 6 (27) ◽  
Author(s):  
S. V. Andryuschenko ◽  
I. A. Zdvizhkova ◽  
N. B. Perunova ◽  
O. V. Bukharin

This report describes the draft genome sequence of Klebsiella pneumoniae strain ICIS-278_PBV, isolated from the feces of a healthy 59-year-old man from Orenburg, Russia. The size of the genome was 5,584,615 bp (57.2% G+C content).


2018 ◽  
Vol 6 (27) ◽  
Author(s):  
Zhaoping Zeng ◽  
Jiandong Shi ◽  
Xiaofang Guo ◽  
Ling Mo ◽  
Ningzhu Hu ◽  
...  

It has been determined that recent dengue virus epidemics in Yunnan, China, originated from Southeast Asian strains. Here, we report the first complete genome sequence and molecular characterization of the imported dengue virus serotype 1 strain YNPE1.


2018 ◽  
Vol 6 (27) ◽  
Author(s):  
Irvan Luhung ◽  
Ana Carolina M. Junqueira ◽  
Akira Uchida ◽  
Rikky W. Purbojati ◽  
James N. I. Houghton ◽  
...  

Pantoea ananatis SGAir0210 was isolated from outdoor air collected in Singapore. The genome was assembled from long reads generated by single-molecule real-time sequencing complemented with short reads.


2018 ◽  
Vol 6 (27) ◽  
Author(s):  
Serene B. Y. Lim ◽  
Ana Carolina M. Junqueira ◽  
Akira Uchida ◽  
Rikky W. Purbojati ◽  
James N. I. Houghton ◽  
...  

Bacillus velezensis strain SGAir0473 (Firmicutes) was isolated from tropical air collected in Singapore. Its genome was assembled using short reads and single-molecule real-time sequencing and comprises one chromosome with 4.18 Mb.


2018 ◽  
Vol 6 (27) ◽  
Author(s):  
Yui Asahina ◽  
Akino Shiroma ◽  
Kazuma Nakano ◽  
Hinako Tamotsu ◽  
Noriko Ashimine ◽  
...  

Lactobacillus paracasei EG9 is a strain isolated from well-ripened cheese and accelerates free amino acid production during cheese ripening. Its complete genome sequence was determined using the PacBio RS II platform, revealing a single circular chromosome of 2,927,257 bp, a G+C content of 46.59%, and three plasmids.


2018 ◽  
Vol 6 (27) ◽  
Author(s):  
Ana Isabela Lopes Sales ◽  
Guilherme Paier Milanez ◽  
Leandro C. Nascimento ◽  
Camila Pinheiro do Carmo ◽  
Fernanda Luz Paulino da Costa ◽  
...  

Draft genomes of three Salmonella enterica 4,[5],12:i:− (STi) strains isolated from human infections were obtained using Illumina sequencing. They were negative for the fljBA operon but positive for hin, and k-mer analyses revealed their identity as S. enterica 4,[5],12:i:− 08-1736 and S.


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