scholarly journals Geometry Reconstruction of Plants

Author(s):  
Ayan Chaudhury ◽  
Christophe Godin
2018 ◽  
Vol 51 (1) ◽  
pp. 60-67 ◽  
Author(s):  
Erick A. Perez-Alday ◽  
Jason A. Thomas ◽  
Muammar Kabir ◽  
Golriz Sedaghat ◽  
Nichole Rogovoy ◽  
...  

2019 ◽  
Vol 17 (1) ◽  
pp. 30-43
Author(s):  
Quan Qi ◽  
Qing-De Li ◽  
Yongqiang Cheng ◽  
Qing-Qi Hong

Abstract Fast high-precision patient-specific vascular tissue and geometric structure reconstruction is an essential task for vascular tissue engineering and computer-aided minimally invasive vascular disease diagnosis and surgery. In this paper, we present an effective vascular geometry reconstruction technique by representing a highly complicated geometric structure of a vascular system as an implicit function. By implicit geometric modelling, we are able to reduce the complexity and level of difficulty of this geometric reconstruction task and turn it into a parallel process of reconstructing a set of simple short tubular-like vascular sections, thanks to the easy-blending nature of implicit geometries on combining implicitly modelled geometric forms. The basic idea behind our technique is to consider this extremely difficult task as a process of team exploration of an unknown environment like a cave. Based on this idea, we developed a parallel vascular modelling technique, called Skeleton Marching, for fast vascular geometric reconstruction. With the proposed technique, we first extract the vascular skeleton system from a given volumetric medical image. A set of sub-regions of a volumetric image containing a vascular segment is then identified by marching along the extracted skeleton tree. A localised segmentation method is then applied to each of these sub-image blocks to extract a point cloud from the surface of the short simple blood vessel segment contained in the image block. These small point clouds are then fitted with a set of implicit surfaces in a parallel manner. A high-precision geometric vascular tree is then reconstructed by blending together these simple tubular-shaped implicit surfaces using the shape-preserving blending operations. Experimental results show the time required for reconstructing a vascular system can be greatly reduced by the proposed parallel technique.


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