Phylogenetic relationships in Polygalaceae based on plastid DNA sequences from the trnL‐F region

Taxon ◽  
2001 ◽  
Vol 50 (3) ◽  
pp. 763-779 ◽  
Author(s):  
Claes Persson
2020 ◽  
Vol 194 (1) ◽  
pp. 84-99
Author(s):  
Inelia Escobar ◽  
Eduardo Ruiz-Ponce ◽  
Paula J Rudall ◽  
Michael F Fay ◽  
Oscar Toro-Núñez ◽  
...  

Abstract Gilliesieae are a South American tribe of Amaryllidaceae characterized by high floral diversity. Given different taxonomic interpretations and proposals for generic and specific relationships, a representative phylogenetic analysis is required to clarify the systematics of this group. The present study provides a framework for understanding phylogenetic relationships and contributing to the development of an appropriate taxonomic treatment of Gilliesieae. Molecular analyses, based on nuclear (ITS) and plastid DNA sequences (trnL-F and rbcL), resolve with strong support the monophyly of the tribe and the differentiation of two major clades. Clade I comprises the genera Gilliesia, Gethyum and Solaria and Clade II includes Miersia and Speea. These well-supported clades are mostly congruent with vegetative and karyotype characters rather than, e.g., floral symmetry. At the generic level, all molecular analyses reveal the paraphyly of Gilliesia and Miersia. Gethyum was found to be paraphyletic, resulting in the confirmation of Ancrumia as a distinct genus. Several instances of incongruent phylogenetic signals were found among data sets. The calibrated tree suggests a recent diversification of the tribe (Pliocene–Pleistocene), a contemporary process of speciation in which instances of hybridization and incomplete lineage sorting could explain patterns of paraphyly and incongruence of floral morphology.


2007 ◽  
Vol 44 (1) ◽  
pp. 240-254 ◽  
Author(s):  
Heroen Verbruggen ◽  
Frederik Leliaert ◽  
Christine A. Maggs ◽  
Satoshi Shimada ◽  
Tom Schils ◽  
...  

2017 ◽  
Vol 24 (2) ◽  
pp. 155-164 ◽  
Author(s):  
Dhafer Ahmed Alzahrani ◽  
Enas Jameel Albokhari

In order to provide a basis for better understanding of phylogenetic relationships of Saudi Arabian Tetraena Maxim. and Zygophyllum L., 44 specimens representing seven taxa, were reconstructed based on chloroplast DNA data of rbcL and trnL-F. The combined chloroplast (rbcL and trnL-F) contributed more phylogenetically informative characters than in individual regions. Phylogenetic analysis of the combined chloroplast (rbcL and trnL-F) and in individual regions based on both of Maximum Parsimony and Bayesian criteria showed that the Saudi Arabian species of Tetraena and Zygophyllum were monophyletic. Zygophyllum fabag L. was nested in one clade with Z. xanthoxylum (Bunge) Engl. (Asian species), and all taxa of Tetraena were distributed in other clades.Bangladesh J. Plant Taxon. 24(2): 155–164.


2009 ◽  
Vol 61 (1) ◽  
pp. 85-91 ◽  
Author(s):  
M. Sabovljevic ◽  
J.P. Frahm

The genetic relationships of Dichelyma capillaceum (With.) Myr. are studied from chloroplast sequences of the trnL-F region. On the basis of the molecular data obtained, the German population can be considered to be derived from Scandinavian(Swedish) rather than North American populations. To judge from the genetic distances between the Swedish and German populations, the separation must have occurred along time ago.


Phytotaxa ◽  
2016 ◽  
Vol 263 (1) ◽  
pp. 18 ◽  
Author(s):  
GERARDO A. SALAZAR ◽  
LIDIA I. CABRERA ◽  
GÜNTER GERLACH ◽  
ERIC HÁGSATER ◽  
MARK W. CHASE

Interspecific phylogenetic relationships in the Neotropical orchid genus Mormodes were assessed by means of maximum parsimony (MP) and Bayesian inference (BI) analyses of non-coding nuclear ribosomal (nrITS) and plastid (trnL–trnF) DNA sequences and 24 morphological characters for 36 species of Mormodes and seven additional outgroup species of Catasetinae. The bootstrap (>50%) consensus trees of the MP analyses of each separate dataset differed in the degree of resolution and overall clade support, but there were no contradicting groups with strong bootstrap support. MP and BI combined analyses recovered similar relationships, with the notable exception of the BI analysis not resolving section Mormodes as monophyletic. However, sections Coryodes and Mormodes were strongly and weakly supported as monophyletic by the MP analysis, respectively, and each has diagnostic morphological characters and different geographical distribution. The geographic structure reflected by the recovered phylogenetic patterns suggests that it is possible to undertake taxonomic revision of regional clades, which eventually will lead to a thorough revision of the genus.


2019 ◽  
Vol 139 ◽  
pp. 106541 ◽  
Author(s):  
Fabrício M. Ferreira ◽  
Reyjane P. Oliveira ◽  
Cassiano A. Dorneles Welker ◽  
Marcos da Costa Dórea ◽  
Ana Luísa de Carvalho Lima ◽  
...  

2016 ◽  
Vol 181 (4) ◽  
pp. 567-584 ◽  
Author(s):  
Sang-Chul Kim ◽  
Jung Sung Kim ◽  
Mark W. Chase ◽  
Michael F. Fay ◽  
Joo-Hwan Kim

2004 ◽  
Vol 91 (11) ◽  
pp. 1863-1871 ◽  
Author(s):  
David A. Baum ◽  
Stacey DeWitt Smith ◽  
Alan Yen ◽  
William S. Alverson ◽  
Reto Nyffeler ◽  
...  

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