scholarly journals Molecular Phylogenetic Analysis of the AIG Family in Vertebrates

Genes ◽  
2021 ◽  
Vol 12 (8) ◽  
pp. 1190
Author(s):  
Yuqi Huang ◽  
Minghao Sun ◽  
Lenan Zhuang ◽  
Jin He

Androgen-inducible genes (AIGs), which can be regulated by androgen level, constitute a group of genes characterized by the presence of the AIG/FAR-17a domain in its protein sequence. Previous studies on AIGs demonstrated that one member of the gene family, AIG1, is involved in many biological processes in cancer cell lines and that ADTRP is associated with cardiovascular diseases. It has been shown that the numbers of AIG paralogs in humans, mice, and zebrafish are 2, 2, and 3, respectively, indicating possible gene duplication events during vertebrate evolution. Therefore, classifying subgroups of AIGs and identifying the homologs of each AIG member are important to characterize this novel gene family further. In this study, vertebrate AIGs were phylogenetically grouped into three major clades, ADTRP, AIG1, and AIG-L, with AIG-L also evident in an outgroup consisting of invertebrsate species. In this case, AIG-L, as the ancestral AIG, gave rise to ADTRP and AIG1 after two rounds of whole-genome duplications during vertebrate evolution. Then, the AIG family, which was exposed to purifying forces during evolution, lost or gained some of its members in some species. For example, in eutherians, Neognathae, and Percomorphaceae, AIG-L was lost; in contrast, Salmonidae and Cyprinidae acquired additional AIG copies. In conclusion, this study provides a comprehensive molecular phylogenetic analysis of vertebrate AIGs, which can be employed for future functional characterization of AIGs.

2010 ◽  
Vol 28 (2) ◽  
pp. 323-328 ◽  
Author(s):  
Xianghai Tang ◽  
Rencheng Yu ◽  
Qingchun Zhang ◽  
Yunfeng Wang ◽  
Tian Yan ◽  
...  

Phytotaxa ◽  
2017 ◽  
Vol 329 (3) ◽  
pp. 277 ◽  
Author(s):  
ANDREW S. URQUHART ◽  
PAULINE M. L. COULON ◽  
ALEXANDER IDNURM

Pilaira australis, a new species of fungus in the coprophilous genus Pilaira, was isolated from emu (Dromaius novaehollandiae) faeces and is described. Morphologically, the species resembles other species in the genus, particularly P. moreaui, except differs in its unique combination of sporangiophore height and sporangiospore length. Molecular phylogenetic analysis indicates that P. australis is distinct from other species in the genus with two regions, the internal transcribed spacers (ITS) and a fragment of the pyrG gene, showing 91% and 90% identity to the nearest species, respectively. Ultrastructure features and carbon utilisation were determined for P. australis, and may provide characteristics for species identification in this genus.


2012 ◽  
Vol 12 (4) ◽  
pp. 421-432 ◽  
Author(s):  
Martin Licht ◽  
Katharina Schmuecker ◽  
Thomas Huelsken ◽  
Reinhold Hanel ◽  
Peter Bartsch ◽  
...  

2007 ◽  
Vol 130 (1-2) ◽  
pp. 53-62 ◽  
Author(s):  
Hongyan Xia ◽  
Lihong Liu ◽  
Niklas Wahlberg ◽  
Claudia Baule ◽  
Sándor Belák

Phytotaxa ◽  
2021 ◽  
Vol 512 (3) ◽  
Author(s):  
YU-YANG ZHOU ◽  
YUN-HAO SI ◽  
ZHEN ZHANG ◽  
QIANG WANG ◽  
YAN YU

Codonopsis atriplicifolia (Campanulaceae) from western Sichuan, China, is described here as a new species, which is similar to C. subscaposa in a number of characters. The results of molecular phylogenetic analysis of 25 species of Codonopsis based on chloroplast DNA fragments (matK, petD with petB-petD, rbcL) show that C. atriplicifolia is closely related to C. farreri. In morphology, the new species is distinctly different from the allied species by its linear-lanceolate leaves with subentire to pinnatipartite margins.


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