scholarly journals EXPERIMENTAL STUDIES ON THE HISTOLOGIC STRUCTURE AND FUNCTION OF AQUAEDUCTUS COCHLEAE

1952 ◽  
Vol 55 (11) ◽  
pp. 907-916
Author(s):  
M. KATAGI
2020 ◽  
Vol 45 (2) ◽  
Author(s):  
Aslı Yenenler ◽  
Umut Gerlevik ◽  
Ugur Sezerman

AbstractObjectiveWe identify the impacts of structural differences on functionality of EG3_S2 endoglucanase enzyme with MD studies. The results of previous experimental studies have been explained in details with computational approach. The objective of this study is to explain the functional differences between shuffled enzyme (EG3_S2) and its native counterpart (EG3_nat) from Trichoderma reseei, via Molecular Dynamics approach.Materials and methodsFor this purpose, we performed MD simulations along 30 ns at three different reaction temperatures collected as NpT ensemble, and then monitored the backbone motion, flexibilities of residues, and intramolecular interactions of EG3_S2 and EG3_nat enzymes.ResultsAccording to MD results, we conclude that EG3_S2 and EG3_nat enzymes have unique RMSD patterns, e.g. RMSD pattern of EG3_S2 is more dynamic than that of EG3_nat at all temperatures. In addition to this dynamicity, EG3_S2 establishes more salt bridge interactions than EG3_nat.ConclusionBy taking these results into an account with the preservation of catalytic Glu residues in a proper manner, we explain the structural basis of differences between shuffled and native enzyme via molecular dynamic studies.


2001 ◽  
Vol 1 ◽  
pp. 119-132 ◽  
Author(s):  
Karl E. Havens

This paper critically evaluates some complex methods that have been used to characterize the structure and function of freshwater plankton communities. The focus is on methods related to plankton size structure and carbon transfer. The specific methods reviewed are 1) size spectrum analysis, 2) size-fractionated phytoplankton productivity, 3) size-fractionated zooplankton grazing, 4) plankton ecological transfer efficiency, and 5) grazer effects on phytoplankton community structure. Taken together, these methods can provide information on community ecological properties that are directly related to practical issues including water quality and fisheries productivity. However, caution is warranted since application without a complete understanding of assumptions and context of the manipulations could lead to erroneous conclusions. As an example, experimental studies involving the addition or removal of zooplankton, especially when coupled with nutrient addition treatments, could provide information on the degree of consumer vs. resource control of phytoplankton. Resource managers subsequently could use this information in developing effective measures for controlling nuisance algal biomass. However, the experiments must be done critically and with sufficient safeguards and other measurements to ensure that treatments (e.g., zooplankton exclosure by screening of water) actually are successful and do not introduce other changes in the community (e.g., removal of large algae). In all of the methods described here, the investigator must take care when generalizing results and, in particular, carry out a sufficient number of replications to encompass both the major seasonal and spatial variation that occurs in the ecosystem.


2020 ◽  
Author(s):  
Marco Aurélio Vinhosa Bastos Jr. ◽  
Paulo Roberto Haidamus de Oliveira Bastos ◽  
Loyná Euá Flores Paez ◽  
Edna Oliveira Souza ◽  
Danielle Bogo ◽  
...  

2020 ◽  
Vol 10 (7) ◽  
Author(s):  
Marco Aurélio Vinhosa Bastos ◽  
Paulo Roberto Haidamus de Oliveira Bastos ◽  
Loyná Euá Flores Paez ◽  
Edna Oliveira Souza ◽  
Danielle Bogo ◽  
...  

2017 ◽  
Vol 68 (4) ◽  
pp. 718 ◽  
Author(s):  
Mark A. Kaemingk ◽  
Jeffrey C. Jolley ◽  
Craig P. Paukert ◽  
David W. Willis ◽  
Kjetil Henderson ◽  
...  

Middle-out effects or a combination of top-down and bottom-up processes create many theoretical and empirical challenges in the realm of trophic ecology. We propose using specific autecology or species trait (i.e. behavioural) information to help explain and understand trophic dynamics that may involve complicated and non-unidirectional trophic interactions. The common carp (Cyprinus carpio) served as our model species for whole-lake observational and experimental studies; four trophic levels were measured to assess common carp-mediated middle-out effects across multiple lakes. We hypothesised that common carp could influence aquatic ecosystems through multiple pathways (i.e. abiotic and biotic foraging, early life feeding, nutrient). Both studies revealed most trophic levels were affected by common carp, highlighting strong middle-out effects likely caused by common carp foraging activities and abiotic influence (i.e. sediment resuspension). The loss of water transparency, submersed vegetation and a shift in zooplankton dynamics were the strongest effects. Trophic levels furthest from direct pathway effects were also affected (fish life history traits). The present study demonstrates that common carp can exert substantial effects on ecosystem structure and function. Species capable of middle-out effects can greatly modify communities through a variety of available pathways and are not confined to traditional top-down or bottom-up processes.


2017 ◽  
Vol 26 (2) ◽  
pp. 17
Author(s):  
Darius Batulevičius ◽  
Gertrūda Skripkienė ◽  
Denas Andrijauskis ◽  
Berta Kėrytė ◽  
Valdas Skripka

The frog is a useful model to study the structure and function of intracardiac neurons. The goal of this study was to evaluate the size and distribution of synaptic boutons on the intracardiac neurons in the frog Rana temporaria. Interatrial septa from four animals were double-labelled immunohistochemically for the cholinergic marker choline acetyltransferase (ChAT) and the marker of synaptic vesicles synaptophysin (SYP). One hundred intracardiac neurons were analysed by confocal microscopy. Terminals of preganglionic axons were strongly positive for ChAT, while synaptic boutons were strongly positive for both ChAT and SYP. The number of synaptic boutons per neuron ranged from 2 to 121 and was 10±2 (mean±SE). The total area of synaptic boutons ranged from 6 μm2 to 270 μm2 and was 98±6 μm2. The largest total area of synaptic boutons was found on the axonal half of neuronal soma (59±4 μm2). The total areas of synaptic boutons on both the non-axonal half of soma and the proximal axon were smaller (36±3 μm2; 6±2 μm2; P<0.001). Synaptic boutons occupied 13±1% of the area of the neuronal soma profile. Conclusions: 1) The axonal half of the soma of the frog intracardiac neuron is more densely innervated than the non-axonal half of the soma. 2) The axosomatic and axoaxonic synapses are present on frog intracardiac neurons. The study provides a framework for further experimental studies on the formation and rearrangement of synapses on frog intracardiac neurons.


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