The Performance Assessment Strategy in DC-BTA Multiple Sequence Alignment
2010 ◽
Vol 439-440
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pp. 35-40
Keyword(s):
A Value
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A brand new performance assessment model is proposed for multiple sequence alignment. The new strategy is based on beam constructing of DC-BTA algorithm, which is a Divide-and-Conquer alignment method with beams. Beams form blocks of almost the identical columns and contribute biggest similarity weight to sequences. A formula to compute all beam areas covering a sequence assigns a value or weight to the sequence. And the total beam area is a partial to the whole alignment. A rate value between 0 and 1 is computed to assess the performance. This scheme is a simple and effective assessment policy in DC-BTA for the convenience of collecting the beam areas.
2012 ◽
Vol 16
(5)
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pp. 615-631
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1997 ◽
Vol 10
(2)
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pp. 67-73
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Keyword(s):
2014 ◽
Vol 23
(3)
◽
pp. 261-275
◽
Keyword(s):
2007 ◽
Vol 50
(5)
◽
pp. 617-626
◽
2006 ◽
pp. 646-653
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