kissing complex
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2021 ◽  
Vol 274 (1343) ◽  
Author(s):  
Yann Palu ◽  
Vincent Pilaud ◽  
Pierre-Guy Plamondon

We interpret the support τ \tau -tilting complex of any gentle bound quiver as the non-kissing complex of walks on its blossoming quiver. Particularly relevant examples were previously studied for quivers defined by a subset of the grid or by a dissection of a polygon. We then focus on the case when the non-kissing complex is finite. We show that the graph of increasing flips on its facets is the Hasse diagram of a congruence-uniform lattice. Finally, we study its g \mathbf {g} -vector fan and prove that it is the normal fan of a non-kissing associahedron.


2020 ◽  
Author(s):  
Joshua A. Imperatore ◽  
Caylee L. Cunningham ◽  
Kendy A. Pellegrene ◽  
Robert G. Brinson ◽  
John P. Marino ◽  
...  

ABSTRACTThe ongoing COVID-19 pandemic highlights the necessity for a more fundamental understanding of the coronavirus life cycle. The causative agent of the disease, SARS-CoV-2, is being studied extensively from a structural standpoint in order to gain insight into key molecular mechanisms required for its survival. Contained within the untranslated regions of the SARS-CoV-2 genome are various conserved stem-loop elements that are believed to function in RNA replication, viral protein translation, and discontinuous transcription. While the majority of these regions are variable in sequence, a 41-nucleotide s2m element within the 3’ UTR is highly conserved among coronaviruses and three other viral families. In this study, we demonstrate that the s2m element of SARS-CoV-2 dimerizes by forming an intermediate homodimeric kissing complex structure that is subsequently converted to a thermodynamically stable duplex conformation. This process is aided by the viral nucleocapsid protein, potentially indicating a role in mediating genome dimerization. Furthermore, we demonstrate that the s2m element interacts with multiple copies of host cellular miRNA-1307-3p. Taken together, our results highlight the potential significance of the dimer structures formed by the s2m element in key biological processes and implicate the motif as a possible therapeutic drug target for COVID-19 and other coronavirus-related diseases.


2018 ◽  
Vol 105 ◽  
pp. 42-48 ◽  
Author(s):  
Mingsha Zhao ◽  
Shanshan Zhang ◽  
Zhiqiang Chen ◽  
Changzhi Zhao ◽  
Li Wang ◽  
...  

ChemBioChem ◽  
2018 ◽  
Vol 19 (7) ◽  
pp. 716-722 ◽  
Author(s):  
Yishen Tian ◽  
Shanshan Zhang ◽  
Li Wang ◽  
Shufeng Liu

2018 ◽  
Vol 1001 ◽  
pp. 143-150 ◽  
Author(s):  
Benoit Chovelon ◽  
Emmanuelle Fiore ◽  
Patrice Faure ◽  
Eric Peyrin ◽  
Corinne Ravelet

Nanoscale ◽  
2017 ◽  
Vol 9 (12) ◽  
pp. 4048-4052 ◽  
Author(s):  
E. Goux ◽  
E. Dausse ◽  
V. Guieu ◽  
L. Azéma ◽  
G. Durand ◽  
...  

2016 ◽  
Vol 88 (5) ◽  
pp. 2570-2575 ◽  
Author(s):  
Benoit Chovelon ◽  
Guillaume Durand ◽  
Eric Dausse ◽  
Jean-Jacques Toulmé ◽  
Patrice Faure ◽  
...  

RSC Advances ◽  
2016 ◽  
Vol 6 (101) ◽  
pp. 99269-99273 ◽  
Author(s):  
Kai Zhang ◽  
Ke Wang ◽  
Xue Zhu ◽  
Minhao Xie ◽  
Fei Xu

A new strategy integrate silver nanoclusters (AgNCs) and riboswitches for the expanding of the application of a kissing complexes-induced sensor (KCIS) for the assay of DNA and RNA was reported.


2015 ◽  
Vol 407 (21) ◽  
pp. 6515-6524 ◽  
Author(s):  
Emma Goux ◽  
Samuele Lisi ◽  
Corinne Ravelet ◽  
Guillaume Durand ◽  
Emmanuelle Fiore ◽  
...  

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