junction detection
Recently Published Documents


TOTAL DOCUMENTS

73
(FIVE YEARS 8)

H-INDEX

15
(FIVE YEARS 1)



2020 ◽  
Vol 23 (2) ◽  
pp. 731-744
Author(s):  
Hasan Al- Khaffaf ◽  
◽  
Abdullah Talib ◽  




2020 ◽  
Author(s):  
Roozbeh Dehghannasiri ◽  
Julia Eve Olivieri ◽  
Julia Salzman

AbstractPrecise splice junction calls are currently unavailable in scRNA-seq pipelines such as the 10x Chromium platform but are critical for understanding single-cell biology. Here, we introduce SICILIAN, a new method that assigns statistical confidence to splice junctions from a spliced aligner to improve precision. SICILIAN’s precise splice detection achieves high accuracy on simulated data, improves concordance between matched single-cell and bulk datasets, increases agreement between biological replicates, and reliably detects un-annotated splicing in single cells, enabling the discovery of novel splicing regulation.



Author(s):  
Lan Shen ◽  
Min Liu ◽  
Chao Wang ◽  
Changhao Guo ◽  
Erik Meijering ◽  
...  




IEEE Access ◽  
2019 ◽  
Vol 7 ◽  
pp. 138094-138109
Author(s):  
Yanli Wang ◽  
Yuchun Huang ◽  
Weihong Huang


Sign in / Sign up

Export Citation Format

Share Document