scholarly journals Mapping of partially overlapping de novo deletions across an autism susceptibility region (AUTS5) in two unrelated individuals affected by developmental delays with communication impairment

2009 ◽  
Vol 149A (4) ◽  
pp. 588-597 ◽  
Author(s):  
Dianne F. Newbury ◽  
Pamela C. Warburton ◽  
Natalie Wilson ◽  
Elena Bacchelli ◽  
Simona Carone ◽  
...  
2010 ◽  
Vol 152A (8) ◽  
pp. 2112-2114 ◽  
Author(s):  
Xin-Li Huang ◽  
Ying S. Zou ◽  
Tom A. Maher ◽  
Stephanie Newton ◽  
Jeff M. Milunsky

2019 ◽  
Vol 7 (8) ◽  
Author(s):  
Sachiko Miyamoto ◽  
Mitsuko Nakashima ◽  
Tsukasa Ohashi ◽  
Takuya Hiraide ◽  
Kenji Kurosawa ◽  
...  

Gene ◽  
2001 ◽  
Vol 272 (1-2) ◽  
pp. 85-91 ◽  
Author(s):  
Kim S. Beyer ◽  
Sabine M. Klauck ◽  
Stefan Wiemann ◽  
Annemarie Poustka

2020 ◽  
Vol 65 (9) ◽  
pp. 727-734 ◽  
Author(s):  
Mitsuko Nakashima ◽  
Mitsuhiro Kato ◽  
Masaru Matsukura ◽  
Ryutaro Kira ◽  
Lock-Hock Ngu ◽  
...  

2020 ◽  
Vol 21 (1) ◽  
Author(s):  
Swati Agarwala ◽  
Avinash M. Veerappa ◽  
Nallur B. Ramachandra

Abstract Background Autism is a neurodevelopmental condition with genetic heterogeneity. It is characterized by difficulties in reciprocal social interactions with strong repetitive behaviors and stereotyped interests. Copy number variations (CNVs) are genomic structural variations altering the genomic structure either by duplication or deletion. De novo or inherited CNVs are found in 5–10% of autistic subjects with a size range of few kilobases to several megabases. CNVs predispose humans to various diseases by altering gene regulation, generation of chimeric genes, and disruption of the coding region or through position effect. Although, CNVs are not the initiating event in pathogenesis; additional preceding mutations might be essential for disease manifestation. The present study is aimed to identify the primary CNVs responsible for autism susceptibility in healthy cohorts to sensitize secondary-hits. In the current investigation, primary-hit autism gene CNVs are characterized in 1715 healthy cohorts of varying ethnicities across 12 populations using Affymetrix high-resolution array study. Thirty-eight individuals from twelve families residing in Karnataka, India, with the age group of 13–73 years are included for the comparative CNV analysis. The findings are validated against global 179 autism whole-exome sequence datasets derived from Simons Simplex Collection. These datasets are deposited at the Simons Foundation Autism Research Initiative (SFARI) database. Results The study revealed that 34.8% of the subjects carried 2% primary-hit CNV burden with 73 singleton-autism genes in different clusters. Of these, three conserved CNV breakpoints were identified with ARHGAP11B, DUSP22, and CHRNA7 as the target genes across 12 populations. Enrichment analysis of the population-specific autism genes revealed two signaling pathways—calcium and mitogen-activated protein kinases (MAPK) in the CNV identified regions. These impaired pathways affected the downstream cascades of neuronal function and physiology, leading to autism behavior. The pathway analysis of enriched genes unravelled complex protein interaction networks, which sensitized secondary sites for autism. Further, the identification of miRNA targets associated with autism gene CNVs added severity to the condition. Conclusion These findings contribute to an atlas of primary-hit genes to detect autism susceptibility in healthy cohorts, indicating their impact on secondary sites for manifestation.


2011 ◽  
Vol 185 (1-2) ◽  
pp. 33-38 ◽  
Author(s):  
Guia Guffanti ◽  
Luisa Strik Lievers ◽  
Maria Teresa Bonati ◽  
Margherita Marchi ◽  
Lupo Geronazzo ◽  
...  

2021 ◽  
Vol 7 (5) ◽  
pp. e618
Author(s):  
Elaine Choi ◽  
Breanne Dale ◽  
Rajesh RamachandranNair ◽  
Resham Ejaz

Background and ObjectivesTo date, all reports of pathogenic variants affecting the GTPase domain of the DNM1 gene have a clinically severe neurodevelopmental phenotype, including severe delays or intractable epilepsy. We describe a case with moderate developmental delays and self-resolved epilepsy.MethodsThe patient was followed by our neurology and genetics teams. After clinical examination and EEG to characterize the patient's presentation, we conducted etiologic workup including brain MRI, chromosomal microarray, genetic and metabolic investigations, and nerve conduction studies. Subsequently, we arranged an Intellectual Disability Plus Trio Panel.ResultsOur patient presented with seizures at 2 days old, requiring phenobarbital. She also had hypotonia, mild dysmorphic features, and mild ataxia. Although initial workup returned unremarkable, the trio gene panel identified a de novo heterozygous pathogenic missense variant in the DNM1 GTPase domain. Now 4 years old, she has been seizure-free for 3 years without ongoing treatment and has nonsevere developmental delays (e.g., ambulates independently and speaks 2-word phrases).DiscussionOur case confirms that not all individuals with DNM1 pathogenic variants, even affecting the GTPase domain, will present with intractable epilepsy or severe delays. Expanding the known clinical spectrum of dynamin-related neurodevelopmental disorder is crucial for patient prognostication and counseling.


2015 ◽  
Vol 24 (25) ◽  
pp. 7450-7450 ◽  
Author(s):  
Zhenfei Ning ◽  
Andrew S. McLellan ◽  
Melanie Ball ◽  
Freda Wynne ◽  
Cora O'Neill ◽  
...  

2015 ◽  
Vol 24 (18) ◽  
pp. 5126-5141 ◽  
Author(s):  
Zhenfei Ning ◽  
Andrew S. McLellan ◽  
Melanie Ball ◽  
Freda Wynne ◽  
Cora O'Neill ◽  
...  

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