A massively parallel speciation‐based differential evolution algorithm applied to the 3D‐AB protein structure prediction

Concurrency and Computation Practice and Experience ◽

10.1002/cpe.6745 ◽

2021 ◽

Author(s):

Rafael Stubs Parpinelli ◽

Mateus Boiani ◽

André E. P. Dias

Keyword(s):

Protein Structure ◽

Differential Evolution ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Differential Evolution Algorithm ◽

Massively Parallel ◽

Evolution Algorithm

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A Knowledge Based Self-Adaptive Differential Evolution Algorithm for Protein Structure Prediction

Lecture Notes in Computer Science - Computational Science – ICCS 2019 ◽

10.1007/978-3-030-22744-9_7 ◽

2019 ◽

pp. 87-100 ◽

Cited By ~ 2

Author(s):

Pedro H. Narloch ◽

Márcio Dorn

Keyword(s):

Protein Structure ◽

Differential Evolution ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Differential Evolution Algorithm ◽

Knowledge Based ◽

Adaptive Differential Evolution ◽

Evolution Algorithm ◽

Self Adaptive

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A Knowledge Based Differential Evolution Algorithm for Protein Structure Prediction

Applications of Evolutionary Computation - Lecture Notes in Computer Science ◽

10.1007/978-3-030-16692-2_23 ◽

2019 ◽

pp. 343-359 ◽

Cited By ~ 2

Author(s):

Pedro H. Narloch ◽

Márcio Dorn

Keyword(s):

Protein Structure ◽

Differential Evolution ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Differential Evolution Algorithm ◽

Knowledge Based ◽

Evolution Algorithm

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Diversification Strategies in Differential Evolution Algorithm to Solve the Protein Structure Prediction Problem

Advances in Intelligent Systems and Computing - Intelligent Systems Design and Applications ◽

10.1007/978-3-319-53480-0_13 ◽

2017 ◽

pp. 125-134 ◽

Cited By ~ 3

Author(s):

Pedro Henrique Narloch ◽

Rafael Stubs Parpinelli

Keyword(s):

Protein Structure ◽

Differential Evolution ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Differential Evolution Algorithm ◽

Prediction Problem ◽

Diversification Strategies ◽

Evolution Algorithm ◽

Protein Structure Prediction Problem

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The Protein Structure Prediction Problem Approached by a Cascade Differential Evolution Algorithm Using ROSETTA

2017 Brazilian Conference on Intelligent Systems (BRACIS) ◽

10.1109/bracis.2017.14 ◽

2017 ◽

Cited By ~ 4

Author(s):

Pedro Henrique Narloch ◽

Rafael Stubs Parpinelli

Keyword(s):

Protein Structure ◽

Differential Evolution ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Differential Evolution Algorithm ◽

Prediction Problem ◽

Evolution Algorithm ◽

Protein Structure Prediction Problem

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DIFFERENTIAL EVOLUTION TO MULTI-OBJECTIVE PROTEIN STRUCTURE PREDICTION

Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms ◽

10.5220/0003767002950298 ◽

2012 ◽

Keyword(s):

Protein Structure ◽

Differential Evolution ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Multi Objective

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Protein structure prediction in an atomic model with differential evolution integrated with the crowding niching method

Natural Computing ◽

10.1007/s11047-020-09801-7 ◽

2020 ◽

Author(s):

Daniel Varela ◽

José Santos

Keyword(s):

Protein Structure ◽

Differential Evolution ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Atomic Model ◽

Niching Method

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Combination of Differential Evolution and Fragment-based Replacements for Protein Structure Prediction

Proceedings of the Companion Publication of the 2015 on Genetic and Evolutionary Computation Conference - GECCO Companion '15 ◽

10.1145/2739482.2768437 ◽

2015 ◽

Cited By ~ 2

Author(s):

Daniel Varela ◽

José Santos

Keyword(s):

Protein Structure ◽

Differential Evolution ◽

Protein Structure Prediction ◽

Structure Prediction

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Differential Evolution for Protein Structure Prediction Using the HP Model

Lecture Notes in Computer Science - Foundations on Natural and Artificial Computation ◽

10.1007/978-3-642-21344-1_34 ◽

2011 ◽

pp. 323-333 ◽

Cited By ~ 16

Author(s):

J. Santos ◽

M. Diéguez

Keyword(s):

Protein Structure ◽

Differential Evolution ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Hp Model

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The Lévy Distributed Parameter Adaptive Differential Evolution for Protein Structure Prediction

Emergence, Complexity and Computation - A Metaheuristic Approach to Protein Structure Prediction ◽

10.1007/978-3-319-74775-0_5 ◽

2018 ◽

pp. 151-167

Author(s):

Nanda Dulal Jana ◽

Swagatam Das ◽

Jaya Sil

Keyword(s):

Protein Structure ◽

Differential Evolution ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Distributed Parameter ◽

Adaptive Differential Evolution ◽

Parameter Adaptive

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A Self-adaptive Differential Evolution with Fragment Insertion for the Protein Structure Prediction Problem

Hybrid Metaheuristics - Lecture Notes in Computer Science ◽

10.1007/978-3-030-05983-5_10 ◽

2018 ◽

pp. 136-149 ◽

Cited By ~ 2

Author(s):

Renan S. Silva ◽

Rafael Stubs Parpinelli

Keyword(s):

Protein Structure ◽

Differential Evolution ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Prediction Problem ◽

Adaptive Differential Evolution ◽

Fragment Insertion ◽

Protein Structure Prediction Problem ◽

Self Adaptive

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