A Feature Selection Approach for Evaluate the Inference of GRNs Through Biological Data Integration - A Case Study on A. Thaliana

Author(s):  
Fábio F. R. Vicente ◽  
Euler Menezes ◽  
Gabriel Rubino ◽  
Juliana de Oliveira ◽  
Fabrício Martins Lopes
2010 ◽  
Vol 7 (2) ◽  
Author(s):  
Benjamin Kormeier ◽  
Klaus Hippe ◽  
Patrizio Arrigo ◽  
Thoralf Töpel ◽  
Sebastian Janowski ◽  
...  

SummaryFor the implementation of the virtual cell, the fundamental question is how to model and simulate complex biological networks. Therefore, based on relevant molecular database and information systems, biological data integration is an essential step in constructing biological networks. In this paper, we will motivate the applications BioDWH - an integration toolkit for building life science data warehouses, CardioVINEdb - a information system for biological data in cardiovascular-disease and VANESA- a network editor for modeling and simulation of biological networks. Based on this integration process, the system supports the generation of biological network models. A case study of a cardiovascular-disease related gene-regulated biological network is also presented.


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