scholarly journals Modern drug design: the implication of using artificial neuronal networks and multiple molecular dynamic simulations

2017 ◽  
Vol 32 (1) ◽  
pp. 299-311 ◽  
Author(s):  
Oleksandr Yakovenko ◽  
Steven J. M. Jones
ChemInform ◽  
2006 ◽  
Vol 37 (45) ◽  
Author(s):  
Hernan Alonso ◽  
Andrey A. Bliznyuk ◽  
Jill E. Gready

2018 ◽  
Vol 93 (1) ◽  
pp. 38-49 ◽  
Author(s):  
Antonio Romo-Mancillas ◽  
Roselyn Lemus ◽  
Raúl Pérez-Estrada ◽  
Francisco Kuribreña-Romero de Terreros ◽  
Lenin Domínguez-Ramírez

2006 ◽  
Vol 26 (5) ◽  
pp. 531-568 ◽  
Author(s):  
Hernán Alonso ◽  
Andrey A. Bliznyuk ◽  
Jill E. Gready

2021 ◽  
Vol 125 (5) ◽  
pp. 1487-1502
Author(s):  
Stephan Mohr ◽  
Felix Hoevelmann ◽  
Jonathan Wylde ◽  
Natascha Schelero ◽  
Juan Sarria ◽  
...  

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Pranay Asai ◽  
Palash Panja ◽  
Raul Velasco ◽  
Milind Deo

AbstractThe pressure-driven flow of long-chain hydrocarbons in nanosized pores is important in energy, environmental, biological, and pharmaceutical applications. This paper examines the flow of hexane, heptane, and decane in carbon nanotubes (CNTs) of pore diameters 1–8 nm using molecular dynamic simulations. Enhancement of water flow in CNTs in comparison to rates predicted by continuum models has been well established in the literature. Our work was intended to observe if molecular dynamic simulations of hydrocarbon flow in CNTs produced similar enhancements. We used the OPLS-AA force field to simulate the hydrocarbons and the CNTs. Our simulations predicted the bulk densities of the hydrocarbons to be within 3% of the literature values. Molecular sizes and shapes of the hydrocarbon molecules compared to the pore size create interesting density patterns for smaller sized CNTs. We observed moderate flow enhancements for all the hydrocarbons (1–100) flowing through small-sized CNTs. For very small CNTs the larger hydrocarbons were forced to flow in a cork-screw fashion. As a result of this flow orientation, the larger molecules flowed as effectively (similar enhancements) as the smaller hydrocarbons.


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