The complete mitochondrial genome and phylogeny of Indian oil sardine, Sardinella longiceps and Goldstripe Sardinella, Sardinella gibbosa from the Indian Ocean

2017 ◽  
Vol 10 (4) ◽  
pp. 735-739 ◽  
Author(s):  
Wilson Sebastian ◽  
Sandhya Sukumaran ◽  
P. U. Zacharia ◽  
A. Gopalakrishnan
Keyword(s):  
Indian Ocean ◽  
Mitochondrial Genome ◽  
Complete Mitochondrial Genome ◽  
Sardinella Gibbosa ◽  
The Indian Ocean ◽  
Sardinella Longiceps

scholarly journals The mitochondrial genome of hydrothermal vent barnacle Eochionelasmus coreana (Cirripedia: Thoracica) from the Indian Ocean

2021 ◽  
Vol 6 (3) ◽  
pp. 710-712
Author(s):  
Won-Kyung Lee ◽  
Benny K. K. Chan ◽  
Se-Jong Ju ◽  
Dongsung Kim ◽  
Se-Joo Kim
Keyword(s):  
Indian Ocean ◽  
Mitochondrial Genome ◽  
Hydrothermal Vent ◽  
The Indian Ocean

scholarly journals The complete mitochondrial genome of a gray reef shark, Carcharhinus amblyrhynchos (Carcharhiniformes: Carcharhinidae), from the Western Indian Ocean

2020 ◽  
Vol 5 (3) ◽  
pp. 3516-3517
Author(s):  
Ela Patel ◽  
Andrea M. Bernard ◽  
Marissa Mehlrose ◽  
Sydney Harned ◽  
Kimberly A. Finnegan ◽  
...  
Keyword(s):  
Indian Ocean ◽  
Mitochondrial Genome ◽  
Complete Mitochondrial Genome ◽  
Western Indian Ocean ◽  
Reef Shark

Characterization of the complete mitochondrial genome of a coconut crab, Birgus latro (Linnaeus, 1767) (Decapoda: Anomura: Coenobitidae), from Okinawa, Japan

2020 ◽  
Vol 40 (4) ◽  
pp. 390-400 ◽  
Author(s):  
Werner P Veldsman ◽  
Yaqin Wang ◽  
Jiaojiao Niu ◽  
J Antonio Baeza ◽  
Ka Hou Chu
Keyword(s):  
Indian Ocean ◽  
Mitochondrial Genome ◽  
Control Region ◽  
Complete Mitochondrial Genome ◽  
Gc Content ◽  
Gene Families ◽  
Full Description ◽  
Population Divergence ◽  
Protein Coding ◽  
Protein Coding Genes

Abstract We present a full description and analysis of the complete mitochondrial genome of a Pacific Ocean specimen of the coconut crab Birgus latro (Linnaeus, 1767), the largest extant terrestrial arthropod in the world. Our de novo-assembled mitogenome has a massive 16,161 times organelle read coverage, a length of 16,411 bp, contains 22 tDNAs (20 unique), 13 protein-coding genes, two rDNAs, and a putative control region of length 1,381 bp. The control region contains three microsatellites and two pairs of inverted repeats. Contrary to the mitochondrial sentinel gene concept, two-dimensional nucleotide analysis reveals higher GC-content in cox gene families than in nadh gene families. Moreover, cox gene families are more conserved than nadh gene families among the species of Coenobitidae selected for comparison. Secondary structure prediction of the 22 tDNAs shows major deviations from the cloverleaf pattern, which points to a relatively high rate of mutation in these genes. We also present a repertoire of mitochondrial variation between our male Okinawan coconut crab and an Indian Ocean specimen that consists of one insertion, one deletion, 135 SNPs, three MNPs and nine complex polymorphisms. We provide confirmatory evidence that the superfamily Paguroidea, to which the coconut crab belongs, is polyphyletic, that all the protein-coding genes of B. latro are under purifying selection, and that a Pacific versus Indian Ocean coconut crab population divergence occurred during the Pleistocene.

scholarly journals Complete mitochondrial genome of the whitetip reef shark Triaenodon obesus from the British Indian Ocean Territory Marine Protected Area

2020 ◽  
Vol 5 (3) ◽  
pp. 2347-2349
Author(s):  
Shaili Johri ◽  
Taylor K. Chapple ◽  
Robert Schallert ◽  
Elizabeth A. Dinsdale ◽  
Barbara A. Block
Keyword(s):  
Indian Ocean ◽  
Mitochondrial Genome ◽  
Protected Area ◽  
Marine Protected Area ◽  
Complete Mitochondrial Genome ◽  
Reef Shark ◽  
Triaenodon Obesus
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