Oligonucleotide probes for Bordetella bronchiseptica based on 16S ribosomal RNA sequences

1994 ◽  
Vol 42 (4) ◽  
pp. 297-305 ◽  
Author(s):  
Atsuyoshi Taneda ◽  
Satoshi Futo ◽  
Shizuo Mitsuse ◽  
Yasuhiro Seto ◽  
Munenori Okada ◽  
...  
Keyword(s):  
Ribosomal Rna ◽  
Bordetella Bronchiseptica ◽  
16S Ribosomal Rna ◽  
Oligonucleotide Probes ◽  
Rna Sequences ◽  
Ribosomal Rna Sequences

Phylogenetic Study of Haloanaerobic Bacteria by 16S Ribosomal RNA Sequences Analysis

1995 ◽  
Vol 18 (2) ◽  
pp. 189-195 ◽  
Author(s):  
Tatjana P. Tourova ◽  
Eugenia S. Boulygina ◽  
Tatjana N. Zhilina ◽  
Richard S. Hanson ◽  
George A. Zavarzin
Keyword(s):  
Ribosomal Rna ◽  
16S Ribosomal Rna ◽  
Phylogenetic Study ◽  
Rna Sequences ◽  
Ribosomal Rna Sequences ◽  
Sequences Analysis

Intraspecific variation of Bufo bufo, based on 16S Ribosomal RNA sequences

2006 ◽  
Vol 27 (2) ◽  
pp. 268-273 ◽  
Author(s):  
Ali Osman Belduz ◽  
Stefano Doglio ◽  
Nurhayat Yilmaz ◽  
Sabriye Canakci ◽  
Bilal Kutrup
Keyword(s):  
Intraspecific Variation ◽  
Ribosomal Rna ◽  
Bufo Bufo ◽  
16S Ribosomal Rna ◽  
Rna Sequences ◽  
Ribosomal Rna Sequences

scholarly journals Phylogenetic position ofGluconobacterspecies as a coherent cluster separated from allAcetobacterspecies on the basis of 16S ribosomal RNA sequences

1995 ◽  
Vol 126 (2) ◽  
pp. 123-126 ◽  
Author(s):  
Martin Sievers ◽  
Christoph Gaberthüel ◽  
Cornelia Boesch ◽  
Wolfgang Ludwig ◽  
Michael Teuber
Keyword(s):  
Ribosomal Rna ◽  
16S Ribosomal Rna ◽  
Phylogenetic Position ◽  
Rna Sequences ◽  
Ribosomal Rna Sequences

Exploring the genetic diversity of the 16S rRNA gene of Akkermansia muciniphila in IBD and IBS

2019 ◽  
Vol 14 (17) ◽  
pp. 1497-1509 ◽  
Author(s):  
Alessandra Lo Presti ◽  
Federica Del Chierico ◽  
Annamaria Altomare ◽  
Francesca Zorzi ◽  
Eleonora Cella ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Ribosomal Rna ◽  
Protective Role ◽  
16S Ribosomal Rna ◽  
Rrna Gene ◽  
Rna Sequences ◽  
Akkermansia Muciniphila ◽  
Ribosomal Rna Sequences ◽  
Bowel Diseases ◽  
Inflammatory Bowel

Aim: The human gastrointestinal tract harbors diverse, abundant microbiota and Akkermansia muciniphila is involved in this community. The aim of this study is to characterize 16 new A. muciniphila 16S ribosomal RNA sequences selected from a metagenomic database from stools of patients with irritable bowel syndrome (IBS), inflammatory bowel diseases and control (CTRLs) subjects by a phylogenetic approach. Materials & methods: A phylogenetic approach was used to study the genetic diversity and SNPs in 16 A. muciniphila 16S ribosomal RNA sequences from stools of 107 individuals, 36 of which were patients affected by IBS, 30 by inflammatory bowel disease and 41 were CTRLs. Results: Phylogenetic analysis confirmed the subdivision into different supported clusters. An increase of variability in IBS has been identified. Conclusion: The genetic variation combined to the relative abundance, contribute to the protective role of A. muciniphila. Phylogenesis represent an additional approach to investigate genetic variability.

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