Biochemical characterization and molecular mechanism of acid denaturation of a novel α-amylase from Aspergillus niger

2018 ◽  
Vol 137 ◽  
pp. 222-231 ◽  
Author(s):  
Junying Wang ◽  
Ying Zhang ◽  
Xingji Wang ◽  
Jinzhao Shang ◽  
Yu Li ◽  
...  
Author(s):  
Katesuda Aiewviriyasakul ◽  
Benjarat Bunterngsook ◽  
Hataikarn Lekakarn ◽  
Wipawee Sritusnee ◽  
Pattanop Kanokratana ◽  
...  

2021 ◽  
Author(s):  
Gregory S Bulmer ◽  
Fang Wei Yuen ◽  
Naimah Begum ◽  
Bethan S Jones ◽  
Sabine S Flitsch ◽  
...  

β-D-Galactofuranose (Galf) and its polysaccharides are found in bacteria, fungi and protozoa but do not occur in mammalian tissues, and thus represent a specific target for anti-pathogenic drugs. Understanding the enzymatic degradation of these polysaccharides is therefore of great interest, but the identity of fungal enzymes with exclusively galactofuranosidase activity has so far remained elusive. Here we describe the identification and characterization of a galactofuranosidase from the industrially important fungus Aspergillus niger. Phylogenetic analysis of glycoside hydrolase family 43 subfamily 34 (GH43_34) members revealed the occurrence of three distinct clusters and, by comparison with specificities of characterized bacterial members, suggested a basis for prediction of enzyme specificity. Using this rationale, in tandem with molecular docking, we identified a putative β-D-galactofuranosidase from A. niger which was recombinantly expressed in Escherichia coli. The Galf-specific hydrolase, encoded by xynD demonstrates maximum activity at pH 5, 25 °C towards 4-Nitrophenyl-β-galactofuranoside (pNP-βGalf), with a Km of 17.9 ± 1.9 mM and Vmax of 70.6 ± 5.3 μmol min-1. The characterization of this first fungal GH43 galactofuranosidase offers further molecular insight into the degradation of Galf-containing structures and may inform clinical treatments against fungal pathogens.


2013 ◽  
Vol 98 (1) ◽  
pp. 967-975 ◽  
Author(s):  
Fatma Elgharbi ◽  
Aïda Hmida-Sayari ◽  
Mouna Sahnoun ◽  
Radhouane Kammoun ◽  
Lobna Jlaeil ◽  
...  

3 Biotech ◽  
2020 ◽  
Vol 10 (7) ◽  
Author(s):  
Peng Song ◽  
Lei Cheng ◽  
Kangming Tian ◽  
Meng Zhang ◽  
Nokuthula Peace Mchunu ◽  
...  

2007 ◽  
Vol 73 (17) ◽  
pp. 5624-5632 ◽  
Author(s):  
Isabelle Benoit ◽  
Michèle Asther ◽  
Yves Bourne ◽  
David Navarro ◽  
Stéphane Canaan ◽  
...  

ABSTRACT The full-length gene that encodes the chlorogenic acid hydrolase from Aspergillus niger CIRM BRFM 131 was cloned by PCR based on the genome of the strain A. niger CBS 513.88. The complete gene consists of 1,715 bp and codes for a deduced protein of 512 amino acids with a molecular mass of 55,264 Da and an acidic pI of 4.6. The gene was successfully cloned and overexpressed in A. niger to yield 1.25 g liter−1, i.e., 330-fold higher than the production of wild-type strain A. niger CIRM BRFM131. The histidine-tagged recombinant ChlE protein was purified to homogeneity via a single chromatography step, and its main biochemical properties were characterized. The molecular size of the protein checked by mass spectroscopy was 74,553 Da, suggesting the presence of glycosylation. ChlE is assembled in a tetrameric form with several acidic isoforms with pIs of around 4.55 and 5.2. Other characteristics, such as optimal pH and temperature, were found to be similar to those determined for the previously characterized chlorogenic acid hydrolase of A. niger CIRM BRFM 131. However, there was a significant temperature stability difference in favor of the recombinant protein. ChlE exhibits a catalytic efficiency of 12.5 × 106 M−1 s−1 toward chlorogenic acid (CGA), and its ability to release caffeic acid from CGA present in agricultural by-products such as apple marc and coffee pulp was clearly demonstrated, confirming the high potential of this enzyme.


2017 ◽  
Vol 27 ◽  
pp. 37-43 ◽  
Author(s):  
Dandan Niu ◽  
Xiaojing Tian ◽  
Nokuthula Peace Mchunu ◽  
Chao Jia ◽  
Suren Singh ◽  
...  

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