scholarly journals Distinct functional roles of two active site thiols in UDPglucose 4-epimerase from Kluyveromyces fragilis.

1992 ◽  
Vol 267 (17) ◽  
pp. 11714-11720
Author(s):  
H Bhattacharjee ◽  
A Bhaduri
Biochemistry ◽  
1994 ◽  
Vol 33 (49) ◽  
pp. 14714-14722 ◽  
Author(s):  
Yishan Li ◽  
Bao-Zhu Yu ◽  
Hongxin Zhu ◽  
Mahendra K. Jain ◽  
Ming-Daw Tsai

Biochemistry ◽  
1992 ◽  
Vol 31 (28) ◽  
pp. 6402-6413 ◽  
Author(s):  
Cynthia M. Dupureur ◽  
Bao Zhu Yu ◽  
Mahendra K. Jain ◽  
Joseph P. Noel ◽  
Tiliang Deng ◽  
...  

2012 ◽  
Vol 445 (2) ◽  
pp. 213-218 ◽  
Author(s):  
Oscar H. Martínez-Costa ◽  
Valentina Sánchez ◽  
Antonio Lázaro ◽  
Eloy D. Hernández ◽  
Keith Tornheim ◽  
...  

Eukaryotic PFK (phosphofructokinase), a key regulatory enzyme in glycolysis, has homologous N- and C-terminal domains thought to result from duplication, fusion and divergence of an ancestral prokaryotic gene. It has been suggested that both the active site and the Fru-2,6-P2 (fructose 2,6-bisphosphate) allosteric site are formed by opposing N- and C-termini of subunits orientated antiparallel in a dimer. In contrast, we show in the present study that in fact the N-terminal halves form the active site, since expression of the N-terminal half of the enzymes from Dictyostelium discoideum and human muscle in PFK-deficient yeast restored growth on glucose. However, the N-terminus alone was not stable in vitro. The C-terminus is not catalytic, but is needed for stability of the enzyme, as is the connecting peptide that normally joins the two domains (here included in the N-terminus). Co-expression of homologous, but not heterologous, N- and C-termini yielded stable fully active enzymes in vitro with sizes and kinetic properties similar to those of the wild-type tetrameric enzymes. This indicates that the separately translated domains can fold sufficiently well to bind to each other, that such binding of complementary domains is stable and that the alignment is sufficiently accurate and tight as to preserve metabolite binding sites and allosteric interactions.


2015 ◽  
Vol 290 (50) ◽  
pp. 30131-30141 ◽  
Author(s):  
Xiangfeng Meng ◽  
Tjaard Pijning ◽  
Justyna M. Dobruchowska ◽  
Gerrit J. Gerwig ◽  
Lubbert Dijkhuizen

2010 ◽  
Vol 66 (2) ◽  
pp. 116-124 ◽  
Author(s):  
Jeyaraman Jeyakanthan ◽  
Shankar Prasad Kanaujia ◽  
Yuya Nishida ◽  
Noriko Nakagawa ◽  
Surendran Praveen ◽  
...  

Asymmetric diadenosine tetraphosphate (Ap4A) hydrolases degrade the metabolite Ap4A back into ATP and AMP. The three-dimensional crystal structure of Ap4A hydrolase (16 kDa) fromAquifex aeolicushas been determined in free and ATP-bound forms at 1.8 and 1.95 Å resolution, respectively. The overall three-dimensional crystal structure of the enzyme shows an αβα-sandwich architecture with a characteristic loop adjacent to the catalytic site of the protein molecule. The ATP molecule is bound in the primary active site and the adenine moiety of the nucleotide binds in a ring-stacking arrangement equivalent to that observed in the X-ray structure of Ap4A hydrolase fromCaenorhabditis elegans. Binding of ATP in the active site induces local conformational changes which may have important implications in the mechanism of substrate recognition in this class of enzymes. Furthermore, two invariant water molecules have been identified and their possible structural and/or functional roles are discussed. In addition, modelling of the substrate molecule at the primary active site of the enzyme suggests a possible path for entry and/or exit of the substrate and/or product molecule.


Biochemistry ◽  
2001 ◽  
Vol 40 (34) ◽  
pp. 10187-10196 ◽  
Author(s):  
Gabriela M. Montero-Morán ◽  
Samuel Lara-González ◽  
Laura I. Álvarez-Añorve ◽  
Jacqueline A. Plumbridge ◽  
Mario L. Calcagno

Biochemistry ◽  
1997 ◽  
Vol 36 (11) ◽  
pp. 3104-3114 ◽  
Author(s):  
Kanagaraj Sekar ◽  
Bao-Zhu Yu ◽  
Joseph Rogers ◽  
John Lutton ◽  
Xiaohong Liu ◽  
...  

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