Integration of molecular networking & in-silico MS/MS fragmentation: a novel dereplication strategy in natural products chemistry

Planta Medica ◽  
2016 ◽  
Vol 81 (S 01) ◽  
pp. S1-S381
Author(s):  
PM Allard ◽  
T Péresse ◽  
J Bisson ◽  
K Gindro ◽  
L Marcourt ◽  
...  
2016 ◽  
Vol 88 (6) ◽  
pp. 3317-3323 ◽  
Author(s):  
Pierre-Marie Allard ◽  
Tiphaine Péresse ◽  
Jonathan Bisson ◽  
Katia Gindro ◽  
Laurence Marcourt ◽  
...  

2020 ◽  
Author(s):  
A. KARUPPUSAMY ◽  
F. F. FIGUEIREDO ◽  
Domingos Tabajara de Oliveira MARTINS ◽  
N.Z.T. JESUS ◽  
A.M. CARABALLO-RODRÍGUEZ

2015 ◽  
Vol 15 (3) ◽  
pp. 253-269 ◽  
Author(s):  
L. Scotti ◽  
H. Ishiki ◽  
F.J.B. Mendonca ◽  
M.S. Silva ◽  
M.T. Scotti

Biomolecules ◽  
2021 ◽  
Vol 11 (2) ◽  
pp. 216
Author(s):  
Nadia A. Rivero-Segura ◽  
Juan C. Gomez-Verjan

The COVID-19 pandemic has already taken the lives of more than 2 million people worldwide, causing several political and socio-economic disturbances in our daily life. At the time of publication, there are non-effective pharmacological treatments, and vaccine distribution represents an important challenge for all countries. In this sense, research for novel molecules becomes essential to develop treatments against the SARS-CoV-2 virus. In this context, Mexican natural products have proven to be quite useful for drug development; therefore, in the present study, we perform an in silico screening of 100 compounds isolated from the most commonly used Mexican plants, against the SARS-CoV-2 virus. As results, we identify ten compounds that meet leadlikeness criteria (emodin anthrone, kaempferol, quercetin, aesculin, cichoriin, luteolin, matricin, riolozatrione, monocaffeoyl tartaric acid, aucubin). According to the docking analysis, only three compounds target the key proteins of SARS-CoV-2 (quercetin, riolozatrione and cichoriin), but only one appears to be safe (cichoriin). ADME (absorption, distribution, metabolism and excretion) properties and the physiologically based pharmacokinetic (PBPK) model show that cichoriin reaches higher lung levels (100 mg/Kg, IV); therefore, it may be considered in developing therapeutic tools.


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