Computer modeling of the 3D structure of human cytochrome P450c21 in a young woman with late-onset AGS and a new mutation within the steroid-21-hydroxylase gene

2005 ◽  
Vol 113 (S 1) ◽  
Author(s):  
J Bojunga ◽  
C Welsch ◽  
M Albrecht ◽  
I Antes ◽  
T Lengauer ◽  
...  
2013 ◽  
Vol 23 (7) ◽  
pp. 562-567 ◽  
Author(s):  
M. Riisager ◽  
M. Duno ◽  
F. Juul Hansen ◽  
T.O. Krag ◽  
C.R. Vissing ◽  
...  

2015 ◽  
Vol 20 (1) ◽  
pp. 60-62 ◽  
Author(s):  
Carolina Lavigne Moreira ◽  
Vanessa D. Marques ◽  
Charles M. Lourenço ◽  
Daisy I. Cabrini ◽  
Jose C. Nuñez ◽  
...  
Keyword(s):  

2018 ◽  
Vol 28 (8) ◽  
pp. 633-638 ◽  
Author(s):  
Lidia Gonzalez-Quereda ◽  
Eduard Gallardo ◽  
Ana Töpf ◽  
Alicia Alonso-Jimenez ◽  
Volker Straub ◽  
...  

Blood ◽  
2016 ◽  
Vol 128 (22) ◽  
pp. 264-264
Author(s):  
Chiara Piubelli ◽  
Annalisa Castagna ◽  
Giacomo Marchi ◽  
Monica Rizzi ◽  
Fabiana Busti ◽  
...  

Abstract Background: Hereditary Hemochromatosis (HH) is a genetically heterogeneous disorder caused by mutations in at least 5 different genes (HFE, HJV, TFR2, SLC40A1, and HAMP) involved in the production and function of the liver hormone hepcidin, a key regulator of iron metabolism. Nevertheless, patients with a HH-like phenotype that remains unexplained, despite extensive sequencing of the known genes, are not infrequently seen at referral centres, implicating the role of still unknown genetic factors. A compelling candidate is Bone Morphogenetic Protein 6 (BMP6), a member of TGFb superfamily, whose expression is stimulated by increased iron stores in the liver. BMP6 acts as a major activator of the BMP-SMAD signalling pathway, ultimately leading to the upregulation of hepcidin gene transcription. Indeed, early this year French Authors have described 3 heterozygous missense mutations in BMP6 (p.Pro95Ser, p.Leu96Pro, and p.Gln113Glu) in 6 unrelated patients with mild to moderate, late onset, unexplained iron overload (Daher R, Gastroenterology 2016). Methods: we recently updated our next generation sequencing (NGS)-based second level genetic test for the molecular diagnosis of non-HFE HH (Badar S, Am J Hematol 2016), by adding a number of novel potential candidate genes, including BMP6, to the panel of the 5 known HH genes. This test was applied to 38 patients evaluated at our tertiary referral centre for iron disorders, because of an unexplained iron overload phenotype. Results: we found 3 heterozygous missense mutations in BMP6 gene in 4 patients with unexplained, late-onset, iron overload, from 3 different families. Their relevant clinical data are summarized into Table 1. Of note, 1 mutation (p.Leu96Pro) was the same recently described by Daher et al. and proven to be functional. The other two mutations (p.Glu112Gln, p.Arg257His) were novel, predicted damaging by bioinformatic tools, and both located in the pro-peptide domain, known to be crucial for appropriate BMP6 processing and secretion. They were further studied by in silico modelling, based on the available 3D structure of the TGFb, which also resulted to be consistent with their pathogenetic role. Conclusions: to the best of our knowledge, our results provide the first independent confirmation of the likely causal role of BMP6 mutations in late onset, moderate iron overload phenotype, unrelated to mutations in the established 5 HH genes. Disclosures No relevant conflicts of interest to declare.


2001 ◽  
Vol 48 (1) ◽  
pp. 53-64 ◽  
Author(s):  
G V Nikiforovich ◽  
S Galaktionov ◽  
J Balodis ◽  
G R Marshall

G-protein coupled receptors (GPCRs) are thought to be proteins with 7-membered transmembrane helical bundles (7TM proteins). Recently, the X-ray structures have been solved for two such proteins, namely for bacteriorhodopsin (BR) and rhodopsin (Rh), the latter being a GPCR. Despite similarities, the structures are different enough to suggest that 3D models for different GPCRs cannot be obtained directly employing 3D structures of BR or Rh as a unique template. The approach to computer modeling of 7TM proteins developed in this work was capable of reproducing the experimental X-ray structure of BR with great accuracy. A combination of helical packing and low-energy conformers for loops most close to the X-ray structure possesses the r.m.s.d. value of 3.13 A. Such a level of accuracy for the 3D-structure prediction for a 216-residue protein has not been achieved, so far, by any available ab initio procedure of protein folding. The approach may produce also other energetically consistent combinations of helical bundles and loop conformers, creating a variety of possible templates for 3D structures of 7TM proteins, including GPCRs. These templates may provide experimentalists with various plausible options for 3D structure of a given GPCR; in our view, only experiments will determine the final choice of the most reasonable 3D template.


2003 ◽  
Vol 41 (1) ◽  
pp. 104-109 ◽  
Author(s):  
Rita Gaspari ◽  
Andrea Arcangeli ◽  
Sonia Mensi ◽  
Denise Schembri Wismayer ◽  
Tommaso Tartaglione ◽  
...  

2001 ◽  
Vol 68 (2) ◽  
pp. 373-385 ◽  
Author(s):  
Daniel Falush ◽  
Elisabeth W. Almqvist ◽  
Ryan R. Brinkmann ◽  
Yoh Iwasa ◽  
Michael R. Hayden

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