Construction of the free energy landscape of biomolecules via dihedral angle principal component analysis

2008 ◽  
Vol 128 (24) ◽  
pp. 245102 ◽  
Author(s):  
Alexandros Altis ◽  
Moritz Otten ◽  
Phuong H. Nguyen ◽  
Rainer Hegger ◽  
Gerhard Stock
Keyword(s):  
Principal Component Analysis ◽  
Free Energy ◽  
Dihedral Angle ◽  
Energy Landscape ◽  
Principal Component ◽  
Component Analysis ◽  
Free Energy Landscape

Free-Energy Landscape of RNA Hairpins Constructed via Dihedral Angle Principal Component Analysis

2009 ◽  
Vol 113 (52) ◽  
pp. 16660-16668 ◽  
Author(s):  
Laura Riccardi ◽  
Phuong H. Nguyen ◽  
Gerhard Stock
Keyword(s):  
Principal Component Analysis ◽  
Free Energy ◽  
Dihedral Angle ◽  
Energy Landscape ◽  
Principal Component ◽  
Component Analysis ◽  
Free Energy Landscape ◽  
Rna Hairpins

Energy landscape of a small peptide revealed by dihedral angle principal component analysis

2004 ◽  
Vol 58 (1) ◽  
pp. 45-52 ◽  
Author(s):  
Yuguang Mu ◽  
Phuong H. Nguyen ◽  
Gerhard Stock
Keyword(s):  
Principal Component Analysis ◽  
Dihedral Angle ◽  
Energy Landscape ◽  
Principal Component ◽  
Component Analysis ◽  
Small Peptide

Hidden Complexity of Protein Free-Energy Landscapes Revealed by Principal Component Analysis by Parts

2010 ◽  
Vol 1 (19) ◽  
pp. 2769-2773 ◽  
Author(s):  
Abhinav Jain ◽  
Rainer Hegger ◽  
Gerhard Stock
Keyword(s):  
Principal Component Analysis ◽  
Free Energy ◽  
Principal Component ◽  
Component Analysis ◽  
Energy Landscapes ◽  
Free Energy Landscapes

scholarly journals 3TA1-03 Principal Component Analysis of Proteins in Dihedral Angle Space(The 47th Annual Meeting of the Biophysical Society of Japan)

2009 ◽  
Vol 49 (supplement) ◽  
pp. S51-S52
Author(s):  
Satoshi Omori ◽  
Sotaro Fuchigami ◽  
Mitsunori Ikeguchi ◽  
Akinori Kidera
Keyword(s):  
Principal Component Analysis ◽  
Annual Meeting ◽  
Dihedral Angle ◽  
Principal Component ◽  
Component Analysis ◽  
Biophysical Society ◽  
Angle Space
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