Comparing causality measures of fMRI data using PCA, CCA and vector autoregressive modelling

Author(s):  
A. Shah ◽  
M. U. Khalid ◽  
Abd-Krim Seghouane
2010 ◽  
Vol 10 (1) ◽  
Author(s):  
Beate Wild ◽  
Michael Eichler ◽  
Hans-Christoph Friederich ◽  
Mechthild Hartmann ◽  
Stephan Zipfel ◽  
...  

1994 ◽  
Vol 4 ◽  
pp. 727-738 ◽  
Author(s):  
A. Fischer ◽  
Heinz Luck

2015 ◽  
Vol 27 (9) ◽  
pp. 1857-1871 ◽  
Author(s):  
Chee-Ming Ting ◽  
Abd-Krim Seghouane ◽  
Muhammad Usman Khalid ◽  
Sh-Hussain Salleh

We consider the problem of selecting the optimal orders of vector autoregressive (VAR) models for fMRI data. Many previous studies used model order of one and ignored that it may vary considerably across data sets depending on different data dimensions, subjects, tasks, and experimental designs. In addition, the classical information criteria (IC) used (e.g., the Akaike IC (AIC)) are biased and inappropriate for the high-dimensional fMRI data typically with a small sample size. We examine the mixed results on the optimal VAR orders for fMRI, especially the validity of the order-one hypothesis, by a comprehensive evaluation using different model selection criteria over three typical data types—a resting state, an event-related design, and a block design data set—with varying time series dimensions obtained from distinct functional brain networks. We use a more balanced criterion, Kullback’s IC (KIC) based on Kullback’s symmetric divergence combining two directed divergences. We also consider the bias-corrected versions (AICc and KICc) to improve VAR model selection in small samples. Simulation results show better small-sample selection performance of the proposed criteria over the classical ones. Both bias-corrected ICs provide more accurate and consistent model order choices than their biased counterparts, which suffer from overfitting, with KICc performing the best. Results on real data show that orders greater than one were selected by all criteria across all data sets for the small to moderate dimensions, particularly from small, specific networks such as the resting-state default mode network and the task-related motor networks, whereas low orders close to one but not necessarily one were chosen for the large dimensions of full-brain networks.


Sign in / Sign up

Export Citation Format

Share Document