Deep Learning in Natural Language Processing: A State-of-the-Art Survey

Author(s):  
Junyi Chai ◽  
Anming Li
2019 ◽  
Author(s):  
Negacy D. Hailu ◽  
Michael Bada ◽  
Asmelash Teka Hadgu ◽  
Lawrence E. Hunter

AbstractBackgroundthe automated identification of mentions of ontological concepts in natural language texts is a central task in biomedical information extraction. Despite more than a decade of effort, performance in this task remains below the level necessary for many applications.Resultsrecently, applications of deep learning in natural language processing have demonstrated striking improvements over previously state-of-the-art performance in many related natural language processing tasks. Here we demonstrate similarly striking performance improvements in recognizing biomedical ontology concepts in full text journal articles using deep learning techniques originally developed for machine translation. For example, our best performing system improves the performance of the previous state-of-the-art in recognizing terms in the Gene Ontology Biological Process hierarchy, from a previous best F1 score of 0.40 to an F1 of 0.70, nearly halving the error rate. Nearly all other ontologies show similar performance improvements.ConclusionsA two-stage concept recognition system, which is a conditional random field model for span detection followed by a deep neural sequence model for normalization, improves the state-of-the-art performance for biomedical concept recognition. Treating the biomedical concept normalization task as a sequence-to-sequence mapping task similar to neural machine translation improves performance.


2021 ◽  
Author(s):  
Oscar Nils Erik Kjell ◽  
H. Andrew Schwartz ◽  
Salvatore Giorgi

The language that individuals use for expressing themselves contains rich psychological information. Recent significant advances in Natural Language Processing (NLP) and Deep Learning (DL), namely transformers, have resulted in large performance gains in tasks related to understanding natural language such as machine translation. However, these state-of-the-art methods have not yet been made easily accessible for psychology researchers, nor designed to be optimal for human-level analyses. This tutorial introduces text (www.r-text.org), a new R-package for analyzing and visualizing human language using transformers, the latest techniques from NLP and DL. Text is both a modular solution for accessing state-of-the-art language models and an end-to-end solution catered for human-level analyses. Hence, text provides user-friendly functions tailored to test hypotheses in social sciences for both relatively small and large datasets. This tutorial describes useful methods for analyzing text, providing functions with reliable defaults that can be used off-the-shelf as well as providing a framework for the advanced users to build on for novel techniques and analysis pipelines. The reader learns about six methods: 1) textEmbed: to transform text to traditional or modern transformer-based word embeddings (i.e., numeric representations of words); 2) textTrain: to examine the relationships between text and numeric/categorical variables; 3) textSimilarity and 4) textSimilarityTest: to computing semantic similarity scores between texts and significance test the difference in meaning between two sets of texts; and 5) textProjection and 6) textProjectionPlot: to examine and visualize text within the embedding space according to latent or specified construct dimensions (e.g., low to high rating scale scores).


2017 ◽  
Vol 24 (4) ◽  
pp. 813-821 ◽  
Author(s):  
Anne Cocos ◽  
Alexander G Fiks ◽  
Aaron J Masino

Abstract Objective Social media is an important pharmacovigilance data source for adverse drug reaction (ADR) identification. Human review of social media data is infeasible due to data quantity, thus natural language processing techniques are necessary. Social media includes informal vocabulary and irregular grammar, which challenge natural language processing methods. Our objective is to develop a scalable, deep-learning approach that exceeds state-of-the-art ADR detection performance in social media. Materials and Methods We developed a recurrent neural network (RNN) model that labels words in an input sequence with ADR membership tags. The only input features are word-embedding vectors, which can be formed through task-independent pretraining or during ADR detection training. Results Our best-performing RNN model used pretrained word embeddings created from a large, non–domain-specific Twitter dataset. It achieved an approximate match F-measure of 0.755 for ADR identification on the dataset, compared to 0.631 for a baseline lexicon system and 0.65 for the state-of-the-art conditional random field model. Feature analysis indicated that semantic information in pretrained word embeddings boosted sensitivity and, combined with contextual awareness captured in the RNN, precision. Discussion Our model required no task-specific feature engineering, suggesting generalizability to additional sequence-labeling tasks. Learning curve analysis showed that our model reached optimal performance with fewer training examples than the other models. Conclusions ADR detection performance in social media is significantly improved by using a contextually aware model and word embeddings formed from large, unlabeled datasets. The approach reduces manual data-labeling requirements and is scalable to large social media datasets.


2019 ◽  
Vol 53 (2) ◽  
pp. 3-10
Author(s):  
Muthu Kumar Chandrasekaran ◽  
Philipp Mayr

The 4 th joint BIRNDL workshop was held at the 42nd ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR 2019) in Paris, France. BIRNDL 2019 intended to stimulate IR researchers and digital library professionals to elaborate on new approaches in natural language processing, information retrieval, scientometrics, and recommendation techniques that can advance the state-of-the-art in scholarly document understanding, analysis, and retrieval at scale. The workshop incorporated different paper sessions and the 5 th edition of the CL-SciSumm Shared Task.


Author(s):  
K.G.C.M Kooragama ◽  
L.R.W.D. Jayashanka ◽  
J.A. Munasinghe ◽  
K.W. Jayawardana ◽  
Muditha Tissera ◽  
...  

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