Single-shot volumetric imaging using optical projection tomography

2021 ◽  
Author(s):  
Connor Darling ◽  
Samuel P. X. Davis ◽  
Sunil Kumar ◽  
Paul M. W. French ◽  
James McGinty
2021 ◽  
Author(s):  
Connor James Darling ◽  
Samuel P.X. Davis ◽  
Sunil Kumar ◽  
Paul M.W. French ◽  
James A McGinty

We present a single-shot adaptation of Optical Projection Tomography (OPT) for high-speed volumetric snapshot imaging of dynamic mesoscopic samples. Conventional OPT has been applied to in vivo imaging of animal models such as D. rerio but the sequential acquisition of projection images required for volumetric reconstruction typically requires samples to be immobilised during the acquisition of an OPT data set. We present a proof-of-principle system capable of single-shot imaging of a 1 mm diameter volume, demonstrating camera-limited rates of up to 62.5 volumes/second, which we have applied to 3D imaging of a freely-swimming zebrafish embryo. This is achieved by recording 8 projection views simultaneously on 4 low-cost CMOS cameras. With no stage required to rotate the sample, this single-shot OPT system can be implemented with a component cost of under 5,000GBP. The system design can be adapted to different sized fields of view and may be applied to a broad range of dynamic samples, including fluid dynamics.


Author(s):  
Andrea Bassi ◽  
Daniele Brida ◽  
Cosimo D’Andrea ◽  
Gianluca Valentini ◽  
Sandro De Silvestri ◽  
...  

Author(s):  
Olli Koskela ◽  
Md Tanvirul Kabir Chowdhury ◽  
Toni Montonen ◽  
Birhanu Belay ◽  
Sampsa Pursiainen ◽  
...  

2018 ◽  
Vol 45 (3) ◽  
pp. 0307012
Author(s):  
李颖超 Li Yingchao ◽  
刘昂 Liu Ang ◽  
李贵叶 Li Guiye ◽  
刘丽娜 Liu Lina ◽  
胡学娟 Hu Xuejuan ◽  
...  

2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Catriona Munro ◽  
Zer Vue ◽  
Richard R. Behringer ◽  
Casey W. Dunn

Abstract The Portuguese man of war, Physalia physalis, is one of the most conspicuous, but poorly understood members of the pleuston, a community of organisms that occupy a habitat at the sea-air interface. Physalia physalis is a siphonophore that uses a gas-filled float as a sail to catch the wind. The development, morphology, and colony organization of P. physalis is very different from all other siphonophores. Here, we look at live and fixed larval and juvenile specimens, and use optical projection tomography to build on existing knowledge about the morphology and development of this species. We also propose a framework for homologizing the axes with other siphonophores, and also suggest that the tentacle bearing zooids should be called tentacular palpons. Previous descriptions of P. physalis larvae, especially descriptions of budding order, were often framed with the mature colony in mind. However, we use the simpler organization of larvae and the juvenile specimens to inform our understanding of the morphology, budding order, and colony organization in the mature specimen. Finally, we review what is known about the ecology and lifecycle of P. physalis.


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