scholarly journals Complete Genome Sequence of a Chinese Highly Pathogenic Porcine Reproductive and Respiratory Syndrome Virus That Has a Further Deletion in the Nsp2 Gene

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
Guobiao Ji ◽  
Yingying Li ◽  
Feifei Tan ◽  
Jinshan Zhuang ◽  
Xiangdong Li ◽  
...  
Keyword(s):  
Amino Acid ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Respiratory Syndrome Virus ◽  
Coding Region ◽  
Highly Pathogenic ◽  
Nsp2 Gene

Here, we report the complete genome of a Chinese highly pathogenic porcine reproductive and respiratory syndrome virus (HP-PRRSV) characterized by a further 29-amino acid (87 nucleotides) deletion in its Nsp2-coding region compared to the prototype of the HP-PRRSV JXA1 strain.

scholarly journals Complete Genome Sequence of a Highly Pathogenic Porcine Reproductive and Respiratory Syndrome Virus Variant with a New Insertion in Glycoprotein 5, Isolated from a Stillborn Fetus

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Can Liu ◽  
Lei Zhang ◽  
Yi-bao Ning
Keyword(s):  
Amino Acid ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Nonstructural Protein ◽  
Respiratory Syndrome Virus ◽  
Highly Pathogenic ◽  
Nonstructural Protein 2 ◽  
Glycoprotein 5 ◽  
Stillborn Fetus

Here, we report the complete genome sequence of strain GD-2011, a highly pathogenic porcine reproductive and respiratory syndrome virus (HP-PRRSV) that was isolated from a stillborn fetus. The GD-2011 strain is characterized by a discontinuous 30–amino acid deletion in the nonstructural protein 2. In addition, GD-2011 had a 1–amino acid insertion in glycoprotein 5, which does not exist in any other HP-PRRSV strains.

scholarly journals Complete Genome Sequence of a Highly Pathogenic Porcine Reproductive and Respiratory Syndrome Virus Variant

2012 ◽  
Vol 86 (16) ◽  
pp. 8906-8906 ◽  
Author(s):  
Chengbao Wang ◽  
Qin Zhao ◽  
Chao Liang ◽  
Lu Dang ◽  
Yuping Ma ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Causative Agent ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Sequence Data ◽  
Nonstructural Protein ◽  
Respiratory Syndrome Virus ◽  
Highly Pathogenic ◽  
Virus Variant ◽  
Accelerate Evolution

Following the 2006 outbreaks of the highly pathogenic porcine reproductive and respiratory syndrome, the causative agent was identified as the highly pathogenic porcine reproductive and respiratory syndrome virus (HP-PRRSV). To investigate whether the HP-PRRSV variant continues circulating and accelerating evolution, we sequenced and analyzed the complete genome of the identified HP-PRRSV field strain SD16. The sequence data indicate that the HP-PRRSV variant continues to prevail and accelerate evolution, especially in the nonstructural protein.

scholarly journals Complete Genome Sequence of a Mosaic NADC30-Like Porcine Reproductive and Respiratory Syndrome Virus in China

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Lin-jian Wang ◽  
Zhenhua Guo ◽  
Songlin Qiao ◽  
Xin-xin Chen ◽  
Gaiping Zhang
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Henan Province ◽  
Respiratory Syndrome Virus ◽  
Highly Pathogenic ◽  
Prrsv Strain ◽  
Highly Pathogenic Prrsv

Here, we report the complete genome of an NADC30-like porcine reproductive and respiratory syndrome virus (PRRSV) strain, HNhx, which was isolated from Henan Province, China, in 2016 and was characterized by recombination with JXA1 strain (an epidemic highly pathogenic PRRSV strain in China) in Nsp4 to Nsp9.

scholarly journals Complete Genome Sequence of a Recombinant NADC30-Like Strain, SCnj16, of Porcine Reproductive and Respiratory Syndrome Virus in Southwestern China

2018 ◽  
Vol 6 (6) ◽  
pp. e00004-18 ◽  
Author(s):  
Long Zhou ◽  
Runmin Kang ◽  
Bo Xie ◽  
Yiming Tian ◽  
Xin Yang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Nonstructural Protein ◽  
Respiratory Syndrome Virus ◽  
Amino Acid Deletion ◽  
Highly Pathogenic ◽  
Nonstructural Protein 2 ◽  
Prrsv Strain ◽  
Highly Pathogenic Prrsv

ABSTRACTThe NADC30-like strains of porcine reproductive and respiratory syndrome virus (PRRSV) are characterized by a 131-amino-acid deletion in nonstructural protein 2 (NSP2). Here, we report the complete genome sequence of a recombinant NADC30-like PRRSV strain, SCnj16, that exhibits the molecular marker of the Chinese highly pathogenic PRRSV (HP-PRRSV) in NSP2.

scholarly journals Complete Genome Sequence of the First Isolate of Hibiscus Latent Singapore Virus Detected in Japan

2018 ◽  
Vol 6 (7) ◽  
Author(s):  
Tetsuya Yoshida ◽  
Yugo Kitazawa ◽  
Yutaro Neriya ◽  
Naoi Hosoe ◽  
Yuji Fujimoto ◽  
...  
Keyword(s):  
Amino Acid ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Nucleotide Identity ◽  
Japanese Isolate ◽  
Encoded Proteins

ABSTRACT The complete genome sequence of the first Japanese isolate of hibiscus latent Singapore virus (HLSV-J) was determined. The genomes of HLSV-J and a reported isolate from Singapore had only 86.7% nucleotide identity, while the encoded proteins shared amino acid identities of more than 95%.

scholarly journals Complete Genome Sequence of Porcine Deltacoronavirus Strain CH/JXJGS01/2016, Isolated in Jiangxi Province, China, 2016

2017 ◽  
Vol 5 (34) ◽  
Author(s):  
Min Zhang ◽  
Yu Ye ◽  
Wang Gong ◽  
Nannan Guo ◽  
Fanfan Zhang ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Amino Acid ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Jiangxi Province ◽  
Accession Number ◽  
Chinese Strain

ABSTRACT The complete genome sequence of a variant of porcine deltacoronavirus, isolated from a diarrheal piglet and designated CH/JXJGS01/2016, was sequenced and analyzed. Phylogenetic analysis demonstrated that CH/JXJGS01/2016 shares the highest nucleotide and amino acid identities with the Chinese strain NH (GenBank accession number KU981059).

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